Shewanella acanthi: K0H61_17135
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Entry
K0H61_17135 CDS
T09152
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sach
Shewanella acanthi
Pathway
sach03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sach00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K0H61_17135 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sach03400
]
K0H61_17135 (mutM)
Enzymes [BR:
sach01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K0H61_17135 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K0H61_17135 (mutM)
DNA repair and recombination proteins [BR:
sach03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K0H61_17135 (mutM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF1631
Motif
Other DBs
NCBI-ProteinID:
QYJ78772
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Position
3997605..3998420
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AA seq
271 aa
AA seq
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MPELPEVEVTRQGIAPHLVEQTVVDFVVRNASLRWPVPELAKQIVGQVIRRVRRRAKYLL
IDTDAGTAIVHLGMSGSLRILPQDTPIEKHDHIDLVFANGRVLRFNDPRRFGAWLWCQLP
EEAHPLLEKLGPEPLTDAFNVEQLAAALKGKKKAIKLCLMDNHIVVGVGNIYANEALFAA
GIHPEAQAGSVDIERLTLLVAEVKQILAHAIKQGGTTLKDFTNADGKPGYFAQKLHVYGR
GGETCTQCGNLLSEIRLGQRTTVFCGICQTR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagtcgaagtcacccgacagggcatagccccccatcttgtagag
caaaccgtcgtggattttgtggtgcgcaatgcctcgttgcgctggcccgtacccgaactt
gctaaacagatcgtgggtcaagtgatccgccgcgtcaggcgcagagcgaaatatctgctt
attgataccgatgcaggcacagcaatagtgcaccttggcatgtcaggcagcttacgcatt
ctgccccaagatacaccgattgaaaaacacgatcatatcgacctcgtattcgccaacggc
cgtgtgctgcgctttaacgacccacgccgatttggcgcttggttatggtgccaactgccg
gaggaagcccatcctctgctggagaaattaggcccagagccgttaaccgatgcctttaat
gtcgagcagttagcggcggcacttaagggtaagaagaaggcgataaaactctgcctaatg
gataaccatatcgtagtaggcgttggcaatatttacgctaacgaggcgctatttgccgcg
ggcattcaccccgaagcgcaggctggtagcgtcgatattgagcgcttaaccttgttagtc
gccgaggtaaaacaaatcctcgcccatgccattaaacagggcggcaccacgcttaaagac
tttactaatgccgatggtaagcctggttactttgcccaaaaacttcacgtttacggccgt
ggcggcgaaacctgtacccaatgtggcaacctgcttagcgagattcgtttaggtcagcgc
accacagtgttctgcggtatctgccaaactcgctag
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