Singulisphaera acidiphila: Sinac_0410
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Entry
Sinac_0410 CDS
T02393
Name
(GenBank) WD40 repeat-containing protein
Organism
saci
Singulisphaera acidiphila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Pkinase
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_EML
PK_Tyr_Ser-Thr
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Ge1_WD40
eIF2A
Beta-prop_IFT80_2nd
Cytochrom_D1
APH
ABC1
Beta-prop_VPS8
Kinase-like
Kdo
Gag_p24_C
Motif
Other DBs
NCBI-ProteinID:
AGA24849
UniProt:
L0D617
LinkDB
All DBs
Position
complement(544709..548374)
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AA seq
1221 aa
AA seq
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MPEIDPHSLPRTTETRSPVRRWVKLWRAGERPDVVAFLSGEGDIGPSEVAAVLRADQRLR
WRSRSDERRSAEWYFERFPAVAADPDLALDLVHGEFLLREEAGEPPDLADFLMRFPQFAE
TIKLQVAFHHALDAAGGRDEPAEAIPDRAGYPHVPGYEILREIGVGGMGVVYLAAQVGLK
RRVALKMIRTIGRIDPEQLDRFHREAEAAACLHHPNIVEIHEIGEADGSPYLSLEVVEGE
DLARRLAAGPVPVQQAARITEVLARAMDYAHDRGVVHRDLKPANILLTPEGSLKIADFGL
AKLLGRESGQTQSGTILGSPCYMSPEQASGRARDVGPASDVYSLGAILYEMLTGSPPFQS
ATPLTTLARLLNEEPVRPGRVSPKVPRDLETICLKCLEKATRKRYASAGELADDLGRFLN
FESVRARRAAAAERVWRWCRRKTSLAVAVGLAIVGIVAAIVLSVSLAVYQYQAASRIGKA
LREVRSSQRQVDQLAAHLAYENGQRLCQQGDVGQGMLWLVRGLKAADRARDAALERALRL
NLTAWKPRLNPLQVRVEHPGEVQAVAYRPDGRVVTTAGDDGTVRFWDAQSGAPVGRPLHH
KGRVGALAFGPEGRTLLTGCDDFTAQLWDLDTYEPAGPPLRHDSIIYGVALSPDGRTALT
GSFDMTARLWDAQTGAPVGLPMRHGNYVSSVAFSPDGLAVLTGSRDKTAQLWDAATGSSL
GKPMVHQDWVSSVAFSPDGRTVLTGCFDQTAQLWDRATGHRVGKPLMHQHCVNAVAFSPD
GTKLVAGCIDGTAWLWDASAGESVGTILRHRHTVSSVAFHPDGRTVLTGGFDRTALVWEV
APPTGLDFRHDGFVRAVIFSPDGRKILSASQDKTARLWDAQTGAPVGAPMPHGDTVEAVA
FSPDGRYALTGSYDGTARLWDSKSGAPAGPPLRHQDRVTAVAFHPDGRTVLTGSDDGTAR
LWATSTGQALGDPLRHSRPVLAVAFSPDGRRAVTGSLDETARVWDATTGAPAGQPLIHQG
PVRAATFSPDGRTVLTGSDDMTARLWDATTGTEVVAPLKHQGPVSLASFSRDGRTVITGG
WDRVARLWDARTGLPEAPPLRHDGRLRTLAISPNGQTVLTGSYDRSAQLWDKVTGLAVGP
AVRHQSQVWFVAFSPDGLFALSGGREHAARLWSLPWVMGGRVARVELTVQAATGMALDDD
GSLQILDLKAWNDCRSQLLQP
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagatcgatccccactccctgcctcgcacgacggagacccggagcccggtccgt
cgctgggtgaagctctggcgagcgggagagcggccggacgtcgtcgccttcctgtccggc
gaaggggacatcgggccaagcgaggtcgccgccgtgctccgggccgaccagaggctgcgt
tggcgatcaaggtcagacgagcggcggtcggcggagtggtatttcgagcgattcccggcg
gtcgccgccgaccccgaccttgcgctcgaccttgtccacggcgagttcctgctccgcgag
gaggcgggggaaccacccgacctggctgacttcctgatgcggttcccccagttcgcggaa
acgatcaagctgcaagtcgccttccatcacgccctcgacgccgcagggggccgtgacgaa
ccggccgaggcaataccggaccgcgcgggttacccgcatgtgccgggctacgagatcctt
cgcgagatcggcgtcggcggcatgggggtcgtctatcttgcagcgcaggtggggctcaag
cggcgggtcgccttgaagatgatccggacgatcgggcgcatcgacccggaacagctcgac
cggttccaccgggaggccgaggccgccgcctgtttgcaccaccccaatatcgtggaaatc
catgagatcggcgaggcggacgggtccccctacctgtcgctggaagtggtcgaaggggag
gacctggcccggcggctggcggcgggccctgtgccggtccagcaggctgcgaggatcacg
gaggtgctggccagggcgatggactacgcccacgatcgcggtgtcgtccatcgcgacttg
aagccggcgaacatcctgctcacgcccgaggggtcactcaagatcgccgacttcggcctg
gcgaagttgctcggcagggagtcggggcagacccagagcggcacgatcctcggctctccc
tgctatatgtcgcccgagcaggcgtcggggcgggcgcgcgacgtggggccggccagcgac
gtctactcgctgggcgcgatcctgtacgagatgctcacggggtcgccgccgttccaatcg
gccaccccgctcaccacgctcgccaggctgctgaacgaggagccggtccggccagggcgg
gtcagcccgaaggtgccccgcgacctggaaacgatctgcctgaagtgcctggagaaggcg
acccgcaagcgttacgcctcggccggggagctggccgacgacctcggccggttcctcaac
ttcgagtcggtccgggcgcggcgggccgcagcggcggagcgggtctggcgctggtgccgg
cggaagacttcgctggcggtcgcggtcggcctggcgatcgtcgggatcgtggcggcgatc
gtgctctcggtgagcctggcagtgtaccagtaccaggccgcgtcacggatcggcaaggcg
ctgcgagaggtccggtcgagccagcggcaggtcgaccagctcgcagcccacctggcttat
gagaacggccagcggctctgccagcaaggggacgtggggcaggggatgctctggctggtg
cgcgggctcaaggccgccgaccgggcccgcgacgcggccctggagcgggccctccgtctg
aacctgacggcctggaagccacggctcaacccgctgcaggtccgggtcgagcaccccggc
gaggtccaggccgtcgcataccggcccgacggccgcgtcgtgaccacggccggcgacgac
ggcaccgtgcgattctgggacgcccagtcgggcgctccggtcggccgcccgctccaccac
aaagggagggtcggcgccctggcgttcggtcccgaggggcggaccctactcaccggctgc
gacgacttcaccgcgcagctctgggacctcgacacctacgagccggccggccctcccctg
cgccacgacagcatcatctacggggtggcgctcagccccgacggccgcaccgccctgacc
gggagtttcgacatgacggcccggctctgggacgcacagacaggtgccccggtcggcctg
ccgatgcggcacggcaactacgtctcctcggtggcgttcagccccgacggcctcgccgtg
ctgaccggtagccgggacaagacggcccagctctgggacgccgccacaggctcctccttg
ggtaagccgatggtgcatcaggactgggtttcctcggtggcgttcagccccgacggccgc
accgtcttgacaggctgcttcgaccagactgcccagctctgggaccgtgccaccggccac
cgcgtggggaagcccttgatgcatcagcactgcgtcaacgccgtggcgttcagccccgac
ggcaccaagctggtggccggctgcatcgacggcaccgcctggctctgggacgcctcggcc
ggggagtcggtcgggaccatcctgcggcaccggcacacagtctcctccgtcgcgttccac
cccgacggccgcaccgtgctcaccgggggcttcgaccgcacggccctcgtctgggaagtc
gcgcctccaacgggtctcgacttccgtcacgacggatttgtccgggccgtgatcttcagc
cccgacggccggaagatcctgtccgccagccaggacaagaccgcgcggctctgggacgca
cagacaggcgcgcccgtcggagcccccatgccgcacggcgatacggtcgaggccgtcgcc
ttcagccccgacggccgatacgccctgaccggaagctacgacggcaccgccaggctctgg
gattccaagagcggagccccggccggcccgccgctccgtcaccaagaccgcgtgaccgcc
gtcgccttccaccccgacggccgcaccgtgctcaccggcagcgacgacggcaccgccagg
ctctgggcgacttcaaccgggcaagcccttggcgaccccctccgccacagccgccccgtg
ctcgccgtcgccttcagccccgacggccggcgtgcggtcaccgggagcctcgacgagacg
gccagagtctgggacgccacgaccggcgcgccggccggccaacccctcattcaccaggga
cccgtccgagccgccacgttcagtcccgacggccgcaccgtgctcaccggcagcgacgac
atgacggcccgactctgggacgccaccacagggaccgaggtcgtcgcccccctcaagcac
caaggccccgtctcactcgcctccttcagtcgcgacggccgcaccgtgatcacgggcgga
tgggaccgagtggcccgactctgggacgccaggacgggcctgccggaagcccctccgctc
cgccacgacggccggctccggaccctggccatcagccccaacgggcaaaccgtgctgacg
gggagttacgaccggtcggcccagctctgggataaagtcacgggcctggccgtcggtccc
gccgttcgccaccagagccaggtctggttcgtcgcgttcagccccgacggcctgttcgcc
ctctccggcggccgagagcacgccgcccgcctctggagcctcccctgggtgatgggcggt
cgcgtcgcacgggtcgaactcaccgtccaggccgccaccggcatggccctcgacgacgac
ggctccctccaaatcctcgacctcaaggcatggaacgactgccgctcccaactcctccag
ccttga
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