Singulisphaera acidiphila: Sinac_0501
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Entry
Sinac_0501 CDS
T02393
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
saci
Singulisphaera acidiphila
Pathway
saci03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
saci00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Sinac_0501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saci03021
]
Sinac_0501
03400 DNA repair and recombination proteins [BR:
saci03400
]
Sinac_0501
Enzymes [BR:
saci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Sinac_0501
Transcription machinery [BR:
saci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Sinac_0501
DNA repair and recombination proteins [BR:
saci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Sinac_0501
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Peptidase_M23
RnfC_N
Plectin
Motif
Other DBs
NCBI-ProteinID:
AGA24936
UniProt:
L0D8I7
LinkDB
All DBs
Position
complement(645872..649579)
Genome browser
AA seq
1235 aa
AA seq
DB search
MPTATTVRRITPPTQKNFGKIYDVFPVPDLTEIQTRSYERFLQADIIAEERADSGLEGVF
REIFPIESYDKTLKLEYIKFDLGKPRYEPDECRQLRLTYGRPLHVWLRLNKGEAAIEESV
YLGDMPIMIGGGEFIINGAERVVVSQLHRSPGVDFVVEIEAGDRKLHACRIIPERGSWIE
LQVTKKETLGVRIDQSGKFSAMTLLRAMSPQFSSDEAILSSFYEPESVDTGDSTAATLLE
GRIACGDIVDPATGEVLIESGTTISKTSAQVLADASLGPVLVLKEAKDPLILQSLQEDPT
TDHESALLRIYQRLRPGNPPQLEKAKELFHEKFFDTNRYRLGKVGRFRINRKFSQTIPED
QMTLDPEDYVNAIRYILNLRKGKGQVDDIDHLGNRRLRTIDELAADELRKGFLKLRRTVQ
ERMSLKDAEDMTPRSLINPKSISAAIEYFFGRGELSQVVDQTNPLAQLTHERRLSALGPG
GLNRKRAGFEVRDVHISHYGRICPIETPEGTNIGLISSLGIYGGVDEYGFLVTPYRQISH
GHRTENVVWMRADEESEAYLAPADAPTEDSGKLKGPSVIARYQTDFHTIPVDQVQFMDIS
PKQMVGVSAGLIPFLEHDDANRALMGSNMQRQAVPLLVAEPPIVATGLERSVAMNSGMIV
KAPADGTVTYVDSSRIIIDHNQIYKLRKYVGLNERTCLNQKPVVEPGQQVKKGQILADGA
ATYLGELALGRNVLVGFMAWDGYNFEDAIIISERLVKEDVYTSIHIEEFEIEIRETKLGR
EEFTRDIPNVSEKALRNLDENGIVRIGTYVKPGEILVGKVAPKSKSELTPEEKLLHAIFG
RAGEDVKNDSLEVPSGVEGIVINTQRFSRRMSLNEDERKVFEKELKDTEQVENVKISEEY
KQLIKALEEAVDGPVLDPSTGKPLGREKDPKILAEESERFKLEALDLRSPERAAEARKVV
RQYAPRIEALRDEKDRRLNSLKRGDELPSGVLQMVKIYIATKRVISVGDKMAGRHGNKGV
IAKILPEEDMPYLPDGTPVEILLNPLGVPSRMNVGQILETHLGWAAAKLGFQAICPVFDG
ASEDTIRQCLKDAGLPENGKALLFDGRTGEQFDQRVTVGYLYMLKLHHLVDDKIHARATG
PYSLITQQPLGGKARFGGQRFGEMEVWALEAYGAAYILQELLTVKSDDVEGRTKIYESMV
KGENTLEAGTPASFDVLTNEIRGLGLNMQLEKKRI
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccgcgaccaccgtacgtcggatcactccgcccacacaaaagaatttcggcaag
atctacgacgtgttcccggttccggacctgaccgagattcagacccgcagctatgagcga
ttccttcaggccgacatcatcgccgaagagcgggccgacagcggcctcgaaggggtcttc
cgggaaatcttcccgatcgagagctacgacaaaacactgaagctggaatacatcaagttc
gacctgggcaaaccgcgctacgaacccgacgagtgccgccagctccgcctgacctacggc
cgcccgctccacgtctggctccgcctcaacaagggggaagccgccatcgaagagtcggtc
tacctcggcgatatgccgatcatgatcggcggcggtgagttcatcatcaacggcgccgag
cgcgtcgtcgtcagccagctccaccgctcaccgggcgtcgacttcgtcgtcgagatcgag
gcgggcgaccgtaagctccacgcctgccggatcatccccgaacggggaagctggatcgag
ctccaagtcaccaagaaagagacgctcggcgtccggatcgaccagtcgggcaagttctcg
gcgatgacgctcctccgcgcgatgagcccacaattctcatccgacgaggcaatcctctcc
tccttctacgagcccgagtcggtcgataccggcgacagcacagccgccaccctgctcgaa
gggcgaatcgcctgcggcgacatcgtcgacccggccaccggcgaagtcttgatcgagagc
ggcacgaccatctccaagacctcggcccaagtcctggccgacgccagcctcggcccggtc
ctggtactcaaggaagcgaaggatccgctgatccttcagtcgctccaggaagacccgacg
accgaccacgaaagcgccttgctccggatctaccagcggcttcgaccgggcaaccccccg
cagctcgagaaggccaaagaactcttccacgagaagttcttcgacaccaaccgctaccgc
ctgggcaaggtcggccggttccggatcaaccggaagttcagccagacgatccccgaagac
cagatgactctggatcccgaggactacgtcaacgcgatccggtacatcctcaacctccgc
aagggcaaagggcaggtcgacgatatcgaccacctgggcaaccgccgcctccgcaccatc
gacgagctggcggccgacgaactccgcaaggggttcctcaagctccgccgcaccgtccag
gagcggatgagcctcaaagacgccgaggacatgaccccgcgctccttgatcaaccccaag
agcatcagcgcggcgatcgagtacttcttcgggcgcggcgagctctcccaggttgttgac
cagaccaacccgctggctcagctcacccacgagcgccgactctcggccctcggccctggt
ggtttgaaccggaaacgagcgggcttcgaggtccgcgacgtccatatttcccactacggc
cgtatctgcccgatcgaaactccggaaggaacgaacatcggtctgatcagctcgttgggg
atctacggcggcgtcgacgagtacggcttcctcgtcaccccctaccggcagatttcgcac
gggcaccgcaccgagaacgtcgtctggatgcgggccgacgaggagagcgaagcttacctc
gccccggctgacgcccccaccgaagactcgggcaagctcaaggggccaagcgtcatcgcc
cggtaccagaccgacttccacaccatccccgtcgaccaagtccagttcatggacatctcg
ccgaagcagatggtgggagtgtcggccggtctgatcccgttcctcgagcacgacgacgcc
aaccgggcgttgatgggctcgaacatgcaacggcaggcagtcccgctcctggtggccgaa
ccgccgatcgtggccacgggcctggagcgctcggtcgccatgaactcggggatgatcgtc
aaggcaccggccgacggcacggtgacctacgtcgactcgtcgcggatcatcatcgaccac
aaccagatctacaagctccgcaagtacgtcggcctcaacgaacggacctgcctgaaccag
aagccggtcgtcgagcccgggcagcaggtcaagaaggggcagatcctggccgacggcgcc
gcgacctacctgggcgagctggccctgggccgcaacgtcctggtcgggttcatggcctgg
gacggctacaacttcgaagacgcgatcatcatcagcgaacgcctcgtgaaggaagacgtc
tacacgtcgatccatatcgaagagttcgagatcgagatccgcgagaccaagctggggcgc
gaggagttcacccgcgacatccccaacgtctcggagaaggcgctgcggaacctggacgag
aacgggatcgtgcggatcggcacctatgtcaaaccgggcgaaatcctggtgggcaaagtg
gcgccgaagtccaagagcgagctgacccccgaagagaagctgctccacgcgatcttcggc
cgggccggtgaagacgtcaagaatgactcgctggaagtcccctcgggcgtcgaagggatc
gtgatcaacacccagcggttcagccgacggatgagcctcaacgaagacgaacgcaaagtc
ttcgagaaggagctcaaggacaccgagcaggtcgagaacgtcaagatctcggaagagtac
aagcagctcatcaaggctctggaagaggccgtcgacggaccggtcctcgacccgtccacc
ggcaagccgttgggccgcgaaaaggacccgaagattctggctgaggagagcgagcggttc
aagctcgaagcactcgacctccgtagtcccgaacgggccgccgaagcgcggaaggtcgtt
cgccagtacgccccgcgaatcgaagcgttgcgagacgagaaggaccgccggctgaatagc
ctgaagcggggcgacgagctcccctcgggcgtgctccagatggtcaagatctacatcgca
accaagcgggtgatctcggtcggcgacaagatggccggtcggcacggcaacaagggggtg
atcgccaagatcctccccgaagaggatatgccgtacctgcccgacggtactccggtcgag
atcctgctgaacccgctgggcgttcccagccgtatgaacgtcggtcagatccttgagacc
cacttgggctgggccgccgccaagctcgggttccaggcgatctgccccgtcttcgacggt
gccagcgaagacacgattcgccagtgcctcaaagacgccggcctgcccgagaacggcaag
gcccttctcttcgacggccgcaccggcgagcagttcgaccagcgtgtgacggttgggtat
ctctacatgctcaagcttcaccacttggtcgatgacaagatccacgctcgtgccaccggc
ccgtactccttgatcacccaacagccgttgggtggtaaagcacggttcggcggccagcgg
ttcggtgaaatggaagtgtgggcgctcgaggcttacggagccgcctacatcctccaagaa
ctgctgacggtcaagagcgacgacgttgaagggcgtacgaagatctacgagtcgatggtc
aagggggagaataccctcgaggccggcactcccgcgagcttcgacgtcttgaccaacgag
atccgcggcctcgggctcaacatgcagctcgagaagaagcggatctga
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integrated database retrieval system
