Singulisphaera acidiphila: Sinac_0515
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Entry
Sinac_0515 CDS
T02393
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
saci
Singulisphaera acidiphila
Pathway
saci02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
saci00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sinac_0515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saci03021
]
Sinac_0515
Transcription machinery [BR:
saci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sinac_0515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
HTH_23
HTH_29
HTH_28
HTH_17
HTH_11
HTH_38
HTH_7
HTH_Tnp_4
HTH_Tnp_1
Mor
HTH_Crp_2
MerR
MerR_1
HTH_Tnp_ISL3
ENT
FliG_M
KORA
Motif
Other DBs
NCBI-ProteinID:
AGA24945
UniProt:
L0D7W5
LinkDB
All DBs
Position
complement(656973..658646)
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AA seq
557 aa
AA seq
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MGSSYCHPALKQLKEQQARFAPKQERLEQVDRAETLLGEIQPEKQYPYEYLWYRIKGYRP
ETAPELLLEGSGVRHDLRLFIEDLSGTVGQAVDQAAEPVLTVEAVCLRFNVSTRTITRWR
RQGLVARRFVIDGRTKVGFLESSVMRFVESHRDQVDRGTRFRQLTDEERDEIIRRARRMA
QVGQGGLVEIARRIARKMGRSTETVRTTLKSYDRGHPDRAIFPPMAGPLDEEAKGQIYRL
YRRGVSAEVLATQFGRTRSSVYRVINEMRALRILSVKLEFMPHPSFDDPTASETILGPMP
LPADGKAPRRTKAPKGLPPYLASLYEVPLLGREQEAHLFRKMNYLKCLANRLRDQIDPSR
ARTSDLDEIERLQEDALAVKNQIIRSNLRLVVSIAKRHVGPSNNFFELVSDGNMSLIRAV
EKFDYARGNKFSTYASWAIMKNFARTIPEENYRRDRFVTGHEEMFEAAADTRIDEHEYES
AQRRNQEAVKGMLGRLDDRERRIIISRYGINGVSEQTLEQLGRELGITKERVRQIESRAQ
DKLRRIAIEEKLDLPML
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggggagcagctattgccacccggccctgaagcagctgaaggagcaacaggctcggttc
gctccgaagcaggagcgactcgaacaggttgatcgggccgagacgttgctaggggagatt
cagccggagaagcagtatccgtacgaatatctctggtatcgcatcaagggatatcgcccc
gaaacggcccccgagcttctgttggaggggagtggggttcgccacgaccttcgtctcttc
attgaggatctgtcagggacggtagggcaagcggtcgatcaagcggcggagccggtgctg
acggtcgaggcggtctgtctccgcttcaacgtgtcgacccggacgatcacgcggtggcgg
cgacaagggttagtggcccggcgattcgtcatcgacgggcgcaccaaggtcgggtttctc
gagtcgagcgtgatgcgattcgttgagtcgcaccgcgaccaggttgaccgggggactcgg
ttccgacaactcactgacgaggagcgggacgagatcattcgtcgcgctcgtcggatggcg
caggtcggccaggggggcctggtcgagattgcgcggaggatcgctcgtaaaatgggacgc
tccacggaaaccgttcgcacgacgctgaagagctacgaccgcggtcatcccgaccgggcg
atctttcccccgatggccggtcctctcgacgaggaggccaaggggcaaatctaccgactc
tatcgccggggcgtctcggccgaggtcctggccacgcaattcggtcggacccgctcgagc
gtctaccgcgtcattaacgagatgcgtgccttgcggatcttgagcgtaaagctcgagttt
atgccgcacccgagcttcgacgatcccacggcctccgagacgatcctggggcccatgccc
ctgccggccgacggtaaggcaccccggcgcaccaaggcacccaaggggctccccccttac
ctggcaagcctctatgaagttcccttgctcgggcgcgaacaggaagcccacctcttccgc
aagatgaactacttaaagtgcctcgccaaccggctccgcgaccagatcgatcccagccgg
gcgcgcaccagcgacctcgacgagatcgaacggctccaggaagacgcgttggcggtcaag
aaccagatcatccgctccaacctccgcctggtcgtctccatcgccaagcggcacgtcggc
ccctcgaataacttcttcgagctggtctccgacggcaatatgtcgctcatccgcgccgtg
gagaagttcgactacgctcgcggcaacaagttcagcacctacgcctcttgggcgatcatg
aaaaacttcgcccggacgatccccgaagagaactaccgacgcgaccggttcgtcaccgga
cacgaagaaatgtttgaagcggccgccgacacccgaatcgacgagcacgagtacgaatcc
gcccagcgccggaaccaggaagccgtcaaggggatgctcggccgactcgacgatcgcgag
cggcggatcatcatcagccgctacggaatcaacggcgtcagcgagcagaccctcgagcag
ctcggtcgcgagcttgggatcaccaaggaacgcgttcggcagatcgaatcacgcgcccag
gataagcttcggaggatcgccatcgaggaaaaactcgacctccccatgctctaa
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