Singulisphaera acidiphila: Sinac_1131
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Entry
Sinac_1131 CDS
T02393
Name
(GenBank) putative domain HDIG-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
saci
Singulisphaera acidiphila
Brite
KEGG Orthology (KO) [BR:
saci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saci03019
]
Sinac_1131
Messenger RNA biogenesis [BR:
saci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sinac_1131
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
AGA25527
UniProt:
L0D8G8
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All DBs
Position
complement(1431759..1432745)
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AA seq
328 aa
AA seq
DB search
MNQLSNGDAVDESFLVADKQLRANRQGNLYLHLELRDKTGSVGARLWNASEGLARTFDPG
DYLRVKGKTQVFQGALQLILSHIEVVDPTKIEPEDYLPQSTQNVARLTARLREILLSISN
PHLRALVECFLIDEEFVRKFTTAPAGIKNHHAYHAGLLEHVVTILTIADRIVDLYPELDR
DLLLTGIFLHDIGKVSELSYDRAFAYSDEGQLVGHLVMGVEMLRDKVEQSADLTGEPFPN
ELLLRLKHMIVSHHGTHEFGSPKLPMTLEAIALHYLDNLDAKIHTFSREIRDDPCRESSW
TPFQQNLGRRLFKGIAQSNGLPDESMEP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcagctgagcaacggagacgcggtcgacgaatcctttttggtcgccgacaagcaa
ctccgtgccaatcgccagggcaatctctacctccacctcgaactgcgagacaagacggga
agcgtcggtgcgcggctctggaatgcgagcgagggactggcgcgaacgttcgatccagga
gactatctccgggtcaaaggcaagactcaagtcttccagggcgccttgcaactgatcctc
tcgcatatcgaagtcgttgatccgacgaagatcgagcctgaggattacctgccgcagagc
acccagaacgtcgcgcgtctgaccgcaaggctccgcgaaatccttctgagcatcagtaat
ccccacttgcgggcgctcgttgagtgcttcctcatcgacgaggagttcgtccgtaagttc
accacggcgccggcgggcattaaaaaccaccacgcctaccacgcggggttgctcgaacac
gtcgtcacgatcctcacgatcgccgatcggatcgtcgacctctaccccgaacttgaccgc
gacctcttgctcacgggcatctttctccacgacatcggcaaggtgagcgagctcagctac
gatcgcgccttcgcctacagtgatgaaggccagctcgtcgggcacttggtcatgggcgtc
gagatgctccgcgacaaggtcgagcagagcgcggacctgacgggcgaaccgttcccgaat
gagctcttgcttcgcctcaagcatatgatcgtcagccatcacggcacccacgagttcggc
agccccaagctgccgatgactctcgaggcgatcgcgctccactatctcgacaacctcgac
gccaagatccacacgttcagccgtgagatccgggacgacccatgccgcgagtcaagctgg
accccgttccagcagaacctgggccggcggctcttcaaggggatcgcacagtcgaacggc
ctcccggacgaatcgatggaaccctga
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