Singulisphaera acidiphila: Sinac_1355
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Entry
Sinac_1355 CDS
T02393
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
saci
Singulisphaera acidiphila
Pathway
saci03030
DNA replication
saci03430
Mismatch repair
saci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sinac_1355
03430 Mismatch repair
Sinac_1355
03440 Homologous recombination
Sinac_1355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saci03032
]
Sinac_1355
03400 DNA repair and recombination proteins [BR:
saci03400
]
Sinac_1355
Enzymes [BR:
saci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sinac_1355
DNA replication proteins [BR:
saci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sinac_1355
DNA repair and recombination proteins [BR:
saci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sinac_1355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
PHP_C
Motif
Other DBs
NCBI-ProteinID:
AGA25740
UniProt:
L0DA50
LinkDB
All DBs
Position
1698328..1701951
Genome browser
AA seq
1207 aa
AA seq
DB search
MSSRPFVHLHCHSHYSLLDGASKLPALVKRAKALEMPALAVTDHGNLYGAVEFLREAKAV
GIKPIVGLEAYVAPRHRTERSMGGGSGKEYAFHLTLLARNGEGVRNLMRLSSASFLEGFY
YKPRIDKEILERHSEGLICLSGCASAEFSDHILYGKTADAEKLCDWYVRVFGEENFFVEI
QDNGIQIQRDCAAGAIDIARRKGLPLVATSDAHYLTQDDSKAHDILLCINTGKTVDDPNR
MKFENDQFHVRSPEEMYAAMPGHEEALATSVRIAEMVEENYKSLNLGKRMFPSFKPPGEK
TPEEYLAELCLTGLRERFGENPPAEATERLDHELGIINRMGFASYFLIVWDFVRFAREEG
IPNSARGSACGALVSYVLYLSHVDPLKYDLLFERFLDPNRSEAPDIDIDLCREQRAKVIE
YVRGKYGAANVAQIGTFGTMAAKAALKDVGRALNIPLSRVDQVTKLIPTRLNITLEEALK
EEPALRRLTEEDPEIAKLLEYARRLEGTARNVGTHAAGVVIADRPLCDMVPLQRLPNKDK
DKEVVSTQWEMGDVEKAGLLKMDFLGLRNLTSLAAAVKLVEKKIGQPLDLLSLPLDDEET
YQLLQRGEARGIFQLDSAGIRDLLVKMKPDRFADLIAILALYRPGPLNGGMVDEYVDVKH
GRKQAVYEHAVMKEVLEDTHGVMVYQEQVMRILNRLGGIELSQAYACIKAISKKKTETIA
QGRKQFVEGAVERGLEKDRATKIFELIEFFGGYGFNKSHSTAYALVLFQTAYLKAHYPTE
YMAALLSTEMDGAEREKFLVEHIEDCKKLGLEVLPPNINEGDAPFRVASEGKIHFGLGAI
KGVGLKAVDEIVRARDKGERFTGLDDLFERVPLTVVSQSCVEALIKAGAFDCLGARRSQW
LAVLPRAAQAGQAVQEDRKRGQRSLFDAFSGAVDESPQNGNGKPTTTSSLPDIPELPDID
RLAEEKKVLGFYMSSHPLARHASLLQALATHSVAHLATVVAKSEVTLGGMITGVQIKSVQ
KSRSGLTRMAKLTFEDLTGSVPAMLWPEQFAQVEEMVKNDLICFVRGALDRRREPAELVI
SKIIPLSKGPAELSRGVVVTLRKGVTEDEQMQRLLRQFRIRPGNLDVYLEILGLSGVRRA
IYKAGAALKIRHDDRMLSDLEAAVGAGNVRLLGNRGATARVEPTVAVATPAPTEADYDYV
ESPSDDD
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccggccgttcgtccacttgcattgccatagccactacagtttgctcgacggc
gccagcaagctgcccgcgctggtcaagcgggcgaaggccttggagatgccggccctggcc
gtcaccgatcacggcaacctatacggggcggtcgagttcttgcgtgaggccaaggcggtg
ggcatcaagccgatcgtggggcttgaggcctacgtcgcgcctcggcatcggaccgagcgg
agcatggggggcggctccggcaaagagtacgctttccaccttaccctgctggcgcgcaac
ggcgagggggtccgcaacctcatgcggctctcgtcggcctcgttcctcgaagggttttac
tacaagccacggatcgacaaggagatcctcgagcggcattccgaagggcttatctgcctc
tcgggctgcgcctcggccgagttctcggaccatatcctctacggcaagacggccgatgcc
gagaagctctgcgactggtacgtccgtgtctttggcgaagagaacttcttcgtcgagatc
caggacaacgggatccagattcagcgcgactgtgcggcgggggcgatcgacatcgcccga
cgcaagggcctccccttggtcgccaccagtgatgcccactacctcacgcaggatgactcc
aaagcacacgatattctcctctgcatcaacacgggcaagacggtcgacgacccgaaccgg
atgaagttcgagaacgaccagttccacgtccgcagccccgaagagatgtacgccgcgatg
cctggccacgaggaggcgctcgccacttcggtccggatcgcggagatggtcgaggagaac
tataagagcctgaacctcggcaaacggatgtttccgtcgttcaagccccccggcgaaaag
accccggaggaatatctcgccgagctctgcctgaccggcctgcgcgaacggttcggcgag
aatccaccggccgaggctacggaacgacttgaccacgagctcggcattatcaaccggatg
gggttcgcgtcctacttcctgatcgtctgggacttcgtccggttcgcccgcgaggagggg
attcccaactcggcgagaggctcggcctgcggtgccttggtcagctatgtgctctacctg
agccatgtcgatccgctcaagtacgacctcctcttcgagcggttcctcgacccgaatcgg
tcggaagcgcctgatatcgacatcgacctttgccgggaacagcgggcgaaggtcatcgag
tacgtccgaggcaagtacggggcggccaacgtcgcccagatcggcaccttcggcacgatg
gccgccaaggcggcgctcaaggacgtcggccgggccctgaacatcccgttgtcccgcgtc
gatcaggtcaccaagctgatcccgacccggctgaacatcaccctggaagaggccctcaag
gaagagccggccctcaggcgtttgaccgaggaagacccggagatcgccaagctccttgag
tatgcaaggcggctggaagggaccgcacgcaacgtcggcacccacgccgctggcgtcgtg
atcgccgaccgcccgctctgcgacatggttccgctccagcggctgccgaacaaagacaag
gacaaggaggtcgtcagcacccagtgggaaatgggcgacgtcgagaaggccggccttctc
aagatggacttcctcggccttcgcaacctgaccagcctggcggctgcggtgaagctcgtt
gagaagaagatcgggcagccgctcgacctgctcagcctgcctctcgacgatgaggagacg
tatcagctcctccagcggggtgaggcgcgggggatcttccagctcgactcggccgggatc
cgtgacttgctggtcaagatgaagcccgaccgcttcgccgacttgatcgcgatcctggcg
ctctaccgtcccggtccgctcaacggcggtatggtcgacgagtatgtcgacgttaagcac
ggtcggaagcaggcggtctatgagcacgccgtgatgaaagaggttcttgaagacacgcac
ggggtcatggtctatcaagaacaggtcatgcggatcttgaaccgcctggggggcatcgaa
ctctcgcaagcgtacgcctgcatcaaggcgatctccaagaagaagaccgagaccatcgcc
caagggcggaagcagttcgtcgagggggcggtcgaacgcggcctggaaaaagatcgcgcg
accaagatcttcgagctcatcgagttcttcggcggttacggtttcaacaagtcgcactcg
acggcctatgccctcgtcctcttccagacggcctacctcaaggcccactaccccaccgaa
tacatggccgccctgctctccaccgagatggacggcgccgagcgggaaaagtttctcgtc
gagcacatcgaagactgtaagaagcttggccttgaggtcttgccccccaatatcaacgag
ggcgatgcgccgtttcgggtcgcctccgaggggaagatccattttggcctgggcgcgatc
aagggggtgggtctgaaggcggtcgatgagatcgtgcgggcccgagacaaaggggagcgg
ttcaccggtctcgacgacctgttcgaacgggtccccttgaccgtggtcagtcagtcgtgc
gttgaagccctcatcaaggcgggtgcgtttgattgcctgggggcccgtcggagccagtgg
ctagccgtcttgccccgagcggcgcaggccggtcaggcggttcaggaggatcgcaaacgg
ggtcagcgcagcctcttcgacgcgttctcgggggccgtcgacgagagccctcaaaacggc
aatggcaagccaacgaccacgtcgagcctgcccgacatccccgagctccctgacatcgat
cgtctggccgaggagaagaaggtcctcggattctacatgtcgagccatcccctggcgcgg
cacgccagcctcttgcaggccctggcgacacacagcgtggcgcacctcgccaccgtcgtg
gccaagtcggaagtcaccttgggggggatgatcaccggcgtgcaaatcaagagcgtccag
aagagccgctccggcctgacccggatggccaagctcaccttcgaggatctgaccggttcg
gttccggccatgctctggcccgagcagttcgctcaggtggaggagatggtcaaaaacgac
ctgatctgcttcgttcgcggggcccttgaccgccgccgcgaaccggccgagctggtgatc
tccaagatcatccccctgagcaaagggccggctgagctctcgcgcggggtcgtggtcacc
cttcgcaaaggggtgacagaggacgaacagatgcagcggttgctccgccaattccggatc
aggcccggcaacctcgacgtctacctcgagatcctcggtctctccggcgtccgtcgcgcg
atctacaaggccggtgcggcactcaagatccgtcacgacgaccgcatgctctccgacctc
gaagccgcggtcggggcgggcaacgtccgccttctgggcaatcgcggggccaccgctcgc
gtcgaaccgaccgtcgcggttgcgaccccggctccgacggaagccgactacgactacgtt
gagtctccctccgacgatgattga
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