Singulisphaera acidiphila: Sinac_1564
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Entry
Sinac_1564 CDS
T02393
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
saci
Singulisphaera acidiphila
Pathway
saci02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
saci00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sinac_1564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saci03021
]
Sinac_1564
Transcription machinery [BR:
saci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sinac_1564
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
DUF722
Sigma70_r4_2
HetR_C
Motif
Other DBs
NCBI-ProteinID:
AGA25943
UniProt:
L0DAT7
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All DBs
Position
1968055..1969725
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AA seq
556 aa
AA seq
DB search
MEKLDEGLKTLLDLGKRRGFLTFDQVNDYLPDEASSPDKIHGLLESLDEMGIELINEDEA
ESRLQASGDSDDEPDELVDEPVDDDDGELTPEDLDEISRRIDDPVRMYLTQMGEIPLLTR
DQEINLAKKIEITRKRFRRKVLECHFALALVVDVLKKVNEGDLPFDRTVKVSVTENLEKD
QILGRMPHNLVTLAHLMECNNRDFRSFIRERDKSARRALMVGLKSRRRKAVNLVEELSIR
TQKVQPLMKRLEQVAARMGELVVQLQDYRAGRGGKEDRSNLQKELKDLMRITLETPKSLR
NRVEAMNSRFKEYEQAKRELSGGNLRLVVSIAKKYRNRGLSFLDLIQEGNTGLMRAVDKY
EYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETMSKLRNVSKKLLQEKGREPT
IEETAKAANISIEETRRVMKISRHPISLDRPVGESEDSYFGDFIEDEAAESPINAATQEM
LKEKIDQVLKTLTYREREIIKLRYGLGDGYTYTLEEVGRIFKVTRERVRQIEAKAVRKLQ
HPVRSRQLEGFLESTG
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctggacgagggcctcaagacgctcctcgatttgggcaaacgccgaggattc
ctgacgttcgatcaggtgaacgactacttgccggacgaggccagtagcccggataagatc
cacggcttgcttgaatcgctcgacgagatgggcattgagttgattaacgaggatgaggcg
gaatcgcgcctccaggcctcgggcgactctgacgacgaacctgatgaactggttgatgag
ccggtcgacgatgatgacggagaattgacgccggaagacctcgacgagatctcgcggcgc
attgacgatccggtccggatgtacctcacccagatgggtgagatcccgctcctgacccgc
gaccaggaaatcaacctcgccaagaagatcgagatcacccgcaagcgattccgccgcaag
gtcctcgagtgccacttcgcgctcgccctggtcgttgacgtcctcaagaaggtcaacgaa
ggggacctcccgttcgatcgcacggtcaaggtgtcggtgaccgagaatctcgagaaagac
cagattctcggccggatgccgcataacctggtgacgctcgcgcacctgatggaatgcaac
aaccgcgacttccgttccttcatccgggaacgcgacaagtcggcgcgtcgggcgttgatg
gtcggcctcaagagccgccgccgcaaggccgtcaacctggttgaggaactctcgatccgg
acgcagaaggtccagccgctcatgaagcggctcgagcaggtcgccgcgcggatgggcgag
ttggtggtccagctccaggactaccgcgccggccgcgggggcaaggaagaccggtccaac
ctgcagaaggaactcaaggacctgatgcggatcaccctcgaaaccccgaaaagcttgcgc
aatcgggtcgaggcgatgaactcacggttcaaagagtacgagcaggccaaacgcgagctc
tccggtggtaaccttcggctggtcgtctcgatcgccaagaagtatcgcaaccgcggtctc
tccttcctcgacctgatccaagaggggaacaccggcctgatgcgggccgtcgacaagtac
gaatatcgccgaggctacaagttcagcacatatgccacttggtggattcggcaggcgatc
acccgcgccatcgctgaccaggcccggacgatccggatcccggtccacatgatcgagacg
atgtcgaagctccgcaacgtctcgaagaaactgcttcaggagaaggggcgcgaacccacg
atcgaagagaccgccaaggccgccaatatctcgatcgaagagacgcggcgggtgatgaag
atctcacgccatccgatctcgctcgaccggccggttggggagagcgaagacagctacttc
ggcgacttcatcgaagacgaggcggccgaaagcccgatcaacgcggccacccaggaaatg
ctcaaagagaagatcgatcaggtcctcaaaaccctgacctatcgagaacgcgagatcatc
aagcttcgctacggcctgggagacggctacacctataccttggaagaggtgggccggatc
ttcaaagtcacccgcgaacgggtccggcaaatcgaagccaaggccgtccgcaagctgcaa
catcctgttcgcagccggcagctcgagggtttcctcgagagtaccggttga
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