Singulisphaera acidiphila: Sinac_2145
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Entry
Sinac_2145 CDS
T02393
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
saci
Singulisphaera acidiphila
Pathway
saci02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
saci00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sinac_2145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saci03021
]
Sinac_2145
Transcription machinery [BR:
saci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sinac_2145
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AGA26478
UniProt:
L0DCB8
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All DBs
Position
complement(2650448..2651296)
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AA seq
282 aa
AA seq
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MATMTRECRSGRFQDGGWLDFGDTPLLTHDEECELGYRIQDGDLDARDHLVRANLRLVAY
IAKKYCNRGVSYADLIAEGNLGLIRAAESFDPEEGTVFYTFAKYWIKQSIILALEIQTRA
ARVPKHAGGWLLKWRRRESELTNTLERRPTHEEIVESLGISSKELGYIEQAMIASRPSSR
VGGPADTDEGDFVPDVVDPREDATLAVDEAMDANPVNLEERLNRLDARERTIIELRFGLN
AEAMTLQAVGQVFGCTRGRVRQLEKKALLKMAVGRTCSKGSK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggctacaatgacgagagaatgccgctcgggtcgttttcaggatggcgggtggctcgac
ttcggggatacgccgctcctgacccatgacgaagagtgtgagttgggctatcggattcag
gacggagatctggacgcccgcgatcatctggtccgtgccaatcttcgactggtcgcctac
atcgccaagaagtactgcaatcgcggcgtgtcctacgcggatctgatcgccgagggcaac
ctggggctgatccgtgcggccgagtcgttcgaccctgaagagggcacggtgttctacacg
ttcgcgaagtactggatcaaacagagcatcatcctggctctcgaaatccagacgcgggcc
gcacgagtgccgaaacatgcgggtggctggcttctcaagtggcgtcgaagggagagtgag
ctaacgaacacgctggagcgtcggccgactcacgaggaaatcgtcgaatccctggggatt
tcaagcaaggaactcgggtacatcgagcaagccatgatcgccagtcggccatctagccgc
gtcggggggcctgcggacactgacgaaggcgattttgtccccgatgtggtcgacccaagg
gaggacgcgacattagccgtggatgaggcgatggacgcgaacccggtcaacctcgaagaa
cgactgaaccgtcttgacgctcgcgaacgcaccatcatcgagctgcgtttcgggctaaac
gccgaggcgatgacgcttcaagctgtcggtcaagtcttcggctgtacgcgagggcgggta
cgccagttggagaaaaaggcgttactcaagatggcggtcgggcggacgtgttcgaagggg
tcgaaatga
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