Singulisphaera acidiphila: Sinac_3080
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Entry
Sinac_3080 CDS
T02393
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
saci
Singulisphaera acidiphila
Pathway
saci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sinac_3080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saci03019
]
Sinac_3080
03110 Chaperones and folding catalysts [BR:
saci03110
]
Sinac_3080
03029 Mitochondrial biogenesis [BR:
saci03029
]
Sinac_3080
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
saci04147
]
Sinac_3080
Enzymes [BR:
saci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Sinac_3080
Messenger RNA biogenesis [BR:
saci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Sinac_3080
Chaperones and folding catalysts [BR:
saci03110
]
Heat shock proteins
HSP60 / Chaperonin
Sinac_3080
Mitochondrial biogenesis [BR:
saci03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Sinac_3080
Exosome [BR:
saci04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Sinac_3080
Exosomal proteins of other body fluids (saliva and urine)
Sinac_3080
Exosomal proteins of breast cancer cells
Sinac_3080
Exosomal proteins of colorectal cancer cells
Sinac_3080
Exosomal proteins of bladder cancer cells
Sinac_3080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
AGA27361
UniProt:
L0DFD0
LinkDB
All DBs
Position
3865587..3867272
Genome browser
AA seq
561 aa
AA seq
DB search
MAKMMAYDEEARQKLASGVTKLARAVRSTLGPRGRNAVIDKGWGSPTVTKDGVTVAEEIE
LTDPYENMGAQLVKEAASKTSDAAGDGTTTATVLAEAIFKEGLKALAAGADPMALKRGIE
KAVEAVVEHVKGQSKKVSGKKEITEVAAIASNNDTIIGEKLADAFEKVGTDGVITVEEGK
GNETTVDVVEGMQFDRGYLSPHFVTDQDRMEVVLEDAYILIYEEKISSPQKLIPLLELIA
RSSKPLVVIAEDIEGEALATLVVNKLRGILKVAAVKAPGYGDRRKAMLGDIAVLTGGKAI
FKDLGIELESVQLTDLGRARKITIDSENTTIVEGVGTQEEIKGRVEMIRREITQTDSEYD
REKLQERLAKLAGGVARINVGAATETEMKERKALVEDALHATRAAIEEGVVPGGGTALIR
AITALDALKLTGDQAMGVQIIRRALEQPARSIAENAGIDGAVVVNKILKSKEANFGYNAD
TGAWGDMFAAGIVDPTKVTRSALQNAASVAGLLLTTEAIIAEPKKKAEAAGHHDDHGGGM
GGMGGMGGMGGMGGMGGMGMM
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagatgatggcctacgatgaggaggcccgccagaagctggcgagcggcgtgacc
aaactggcccgggccgtccggagcaccctgggcccgcgcggccgcaacgccgtgatcgac
aagggctggggcagcccgaccgtcaccaaagacggcgtgaccgtggccgaggagatcgag
ctgaccgatccctacgaaaacatgggtgcccaactcgtcaaggaggccgccagcaagacc
tccgacgctgcgggcgacggcacgacgactgccaccgtcctggccgaggccatcttcaag
gaagggctcaaagctctggccgcgggcgccgatccgatggcgctgaagcgagggatcgaa
aaggccgtcgaggccgttgtcgagcacgtgaaggggcaatccaagaaggtctccggcaag
aaggagatcaccgaggttgccgccatcgcctcgaataacgacacgatcatcggcgagaag
ctggccgacgccttcgaaaaggtgggcaccgacggcgtcatcaccgtcgaagaaggcaag
gggaacgagaccaccgtcgacgtggtcgaggggatgcagttcgaccggggctacctctcc
ccccatttcgtcaccgaccaggatcggatggaagtcgtcctcgaagacgcctacatcctg
atctacgaagagaagatcagctccccccagaagctgatcccgttgctcgagctgatcgcc
cggtcgagcaaaccgctcgtcgtgatcgccgaggacatcgaaggcgaagcgctggcgacc
ctggtcgtcaacaagctccgcggcatcctcaaggtcgcggccgtcaaggcccccggctac
ggtgaccgccgcaaggcgatgctcggcgacatcgccgtcctcaccggtggcaaggcgatc
ttcaaggacctcggcatcgagctcgagagcgtccagctcaccgacctcggccgcgcccgc
aagatcacgatcgacagcgaaaacaccacgatcgtcgaaggcgtgggcacccaggaggag
atcaagggacgggtcgagatgatccgccgcgagatcacccagaccgacagcgagtacgac
cgcgagaagctccaagagcgtctggccaagctcgccggcggcgtcgcccgcatcaacgtc
ggtgcggccaccgagaccgagatgaaagagcgcaaggctctggtcgaagacgccctgcac
gcgacccgcgctgcgatcgaggaaggggtcgtccccggtggtggcaccgccttgatccgg
gcgatcaccgcactcgacgccctcaagctgaccggcgaccaggcgatgggcgtccagatc
attcgccgcgccctcgagcagcccgcacgctcgatcgccgagaacgccggcatcgacggt
gccgtcgtggtcaacaagatcctcaagtccaaggaagccaacttcggctacaacgccgac
accggcgcctggggcgacatgttcgccgccggcatcgttgaccccaccaaggtcacacgc
tcggccctccagaacgccgcttccgtcgccggcctgctcctgaccaccgaagccatcatc
gccgaacccaagaagaaggcggaagccgccggtcaccacgatgaccacggcggaggcatg
ggcggcatgggcggcatgggaggaatgggtggcatgggcggaatgggtggcatggggatg
atgtaa
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integrated database retrieval system
