Singulisphaera acidiphila: Sinac_3716
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Entry
Sinac_3716 CDS
T02393
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
saci
Singulisphaera acidiphila
Brite
KEGG Orthology (KO) [BR:
saci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saci03032
]
Sinac_3716
03036 Chromosome and associated proteins [BR:
saci03036
]
Sinac_3716
03400 DNA repair and recombination proteins [BR:
saci03400
]
Sinac_3716
DNA replication proteins [BR:
saci03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sinac_3716
Chromosome and associated proteins [BR:
saci03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Sinac_3716
DNA repair and recombination proteins [BR:
saci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Sinac_3716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF4777
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AGA27955
UniProt:
L0DGH7
LinkDB
All DBs
Position
4651683..4652114
Genome browser
AA seq
143 aa
AA seq
DB search
MNRLSRRENVIVTKKEIVKKISEDIGLTQLKTKDIVQRTLDAIIHTLVSEGRIELRNFGV
FEVKQRAPRKARNPRTGDKVFVPSKNVVTFKPGKEMEELVRKMNPENLPLLEEDSDADEE
GNGPVETATESRAESPAGADALD
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggctttcccgcagggagaacgtcatcgtgaccaagaaagaaatcgtcaagaag
atctctgaagatatcgggctgacccagctcaagacgaaagatatcgtccagcgaaccctt
gacgcaatcatccacacgttggtctccgaggggcgaatcgaactgcgaaacttcggtgtt
ttcgaggtcaagcaacgggcgcctcggaaggcgaggaacccgcgaaccggggacaaggtt
ttcgtgccttcgaagaacgtggtcacgtttaagccgggcaaagagatggaagaattggtc
cgaaagatgaatccggaaaatcttcccttattggaagaggactcggatgccgatgaagaa
ggcaacggacctgttgagacggccaccgaatctcgggcagaatcgcccgccggggccgac
gccttggattga
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integrated database retrieval system
