Singulisphaera acidiphila: Sinac_4147
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Entry
Sinac_4147 CDS
T02393
Name
(GenBank) Cadherin domain-containing protein,putative collagen-binding protein
Organism
saci
Singulisphaera acidiphila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5650
Cadherin
MBG_2
SdrD_B
SpaA
Cadherin_4
Y_Y_Y
ZirS_C
Motif
Other DBs
NCBI-ProteinID:
AGA28357
UniProt:
L0DGG5
LinkDB
All DBs
Position
5171629..5178234
Genome browser
AA seq
2201 aa
AA seq
DB search
MSFASRISSLVAPRSRSRVKAVRRNRAFGVNRGAFLEPLEARLNLSAAFPEFVDPHPAAG
NQFGAVVVPLSTGNVVITSPFDDAGGADAGAVYLFNGANGTLISTLRGSHSGDNIGSDGV
TALGNGNYVIASSGWDNGGTFNAGAATWGSGTAGVGGIVSAANSLVGTSPGDSVGNGGVT
ALANGNYVVRSYTWSAAKGAVTWGSGATGIAGAVSASNSLVGTTADDQVGSSGVTALANG
NYLVRSGRWDNGAADQAGAVTWSSGTTGITGVVSSTNSLVGSTAGDAIGASAVTILSNGN
YVVISSSWDNGPGKADAGAVTWGSGASGVTGTISAVNSLVGNKAGDAIGSSGVTALSNGN
YVIASPFWDNEALGNFDTGAATWGSGIAGVVGTVSTVNSLVGSKTGDNVSNGGVTALSTG
NYVVASPFWDNGTTSNAGAATWGSGTSGVAGTISATNSLVGTTTSDRVGNAGATALANGN
YVVVSSLWFNGTGAATWGMGASGVVGAVSASNSLVGSGTGDTVGSGGVTVLTNGNYVVSS
PGWDNGAVVNAGAATWGSGVTGRTGTISASNSLVGDKANDNVGAVVTALSNGNYVVSSPG
WDKGAVVNAGATTWGNGTSGAVGIVSVSNSLVGATADDGGSSSVIALGNGNYVVRSLVWD
NGTVVNAGAATWGSGTTGRTGTISASNSLVGSTANDSIANLGVTALSNGNYVVSSSAWDN
GAIANACAVTWGSGATGVFGAISASNSAIGTGASSGLQAVVLDNINNTYFVRFLNEGGGR
VRVGSQLSGFLNHTPTNIALSSSTIPENQPGGLPGILVGTFSTTDEDLGDVFTYSLVPGT
GGTDNFNFSIDPAGHLMAPFTFNYEVKNSYSIRVRTRDQGGLFFEQVFTISVTNVNEAPT
IAMQDFFVPENTGNGVIVGTVVASDPDAADTKTFSITLGNSLGAFAISAAGVITVADSTR
LDYETNPGFYLQVKVTDAGGLFASNMVSILLTNVNETPTNMALTASSIPENRPVGTSVGA
FTTSDPDYGNTFIYALVSGTGDTDNASFNIDPAGQLRSAASFDFEAKSSYSIRVRSTDQG
GLFVERVFTVAVTNVNEAPTVTADVAAVTVYEGGNATNSGTFSDVEGNNTVAVTASVGTV
TQNNTSGTWSWSLNAADGPSGPFTVFITARDSQNAVAIATFIYTVDNVLPTISLSGNATV
DEGSPYTLHLGAVTDPGQDTITSYRIDWGDGVTTDFTGNPAHTTATHTYADGPSTRTHTV
SVTDEDGIDILAGSLSVTVNNVAPTAVLLTNSGIRYGIAATAAFTDMFDPSIVDTEAGLR
FVFSIGTDTTGSATYAGSSTSPSANFGVLNAGSYTVYARIIDKDGGSNVYTTTITVGKAD
AVFSLSGYAVTYDGTAHSASGTATGVLGEALSGLNFAGTTHTGAIASHTATVTFTDVTGN
YNDAALLVPVSIAKANAAVTVSGYSGKYDAASHGATGTASGVGGTDLAAYLSLGARFTDA
PGGLAHWVFSGGANYLDQAGDVAIAIAKADATFSITPYVGVTYDGAAHTAIVTATGAALA
NLSAGLDLSGTTHVGAGTYAGDVWSFAGGTNYNDASGTVDNSIAKADAVFSLSGYAVTYD
GTAHSASGTATGVMGEALSGLNFAGTTHTGAIASHTATVTFTDVTGNYNDAALLVPVSIA
KANAAVTVSGYSGRYDAASHGATGTASGVGGADLTVGLSLGARFTDAPGGLAHWVFSGGA
NYLDQAGDVAIAIAKADATVSVAGYSGIYDAAAHGLVGTAIGVNGESLGGLVFGTGRTNA
GTSTVGWTFTGGRNYRDASGTQDVVIAQRPITVTADPQTKSTGQADPDLTYQISAGSLAG
NDGLTGSLSREAGEAAGRYAIRRGTLDAGPNYAMSFVGADLVITVATSSLSGTVFVDFNK
DGQVDFGEKGIAGATVHLTGTDDLGRAVDQVLQTDLDGAYVFRFLRPGNYRINETQPAGY
AQGTNTVGTVGGTASGDAFAVTLAADMTGLNYNFGERPAATGSLQRGQTAGIGFWNNKNG
QALIKSLNDGPSSTQLGNWLAATLPNLYGATAGACSLAGKTNAQVAAFYQTRFVLKGTKV
DAQVLSSALSVYVTNATLDSTRVAERYGFTVTQYGFGATGLFNVGSYGSVFGVVNNTTVT
VLDLLIAVNDRSAAGSLFKGDTFKRLIADIVFGLINEIGGI
NT seq
6606 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgcatcacggatttcctccctggttgcgccccgcagtcgctcgcgagttaag
gctgttcgccgcaaccgggcgtttggggtcaatcgcggggcgtttctcgaaccgctggaa
gcccgcctgaacctctcggccgcgttcccggagttcgtcgacccgcacccggcggcgggc
aaccagttcggggcggtcgtggtgccgctgagcacgggaaacgtggtcatcacgtcaccc
tttgatgacgccggaggggccgatgcgggcgcggtctatctgttcaacggcgcgaacggc
accctgattagcacgttgcgaggttcgcattccggcgacaatatcggaagcgacggtgtg
actgcgctgggcaacggcaactacgtgatcgccagttcggggtgggataacggtggcacc
tttaacgccggtgcggcgacgtggggcagcggtactgcgggggtcggagggatcgtctcc
gctgccaacagcctcgtcggcacctcgcctggcgacagtgtcggtaacggcggcgtgacg
gcactggctaatggtaactatgtcgttcgcagctatacgtggtccgcagccaaaggtgcg
gtgacgtgggggagtggcgccacggggatcgcgggggcagtctccgcctcgaacagcctc
gtcggtacgaccgccgatgatcaggttggcagcagtggtgtgacggcgttggccaacggc
aactacctggttcgaagtggacgctgggacaacggcgctgccgaccaggccggggcggtc
acctggagcagcggaaccacagggattaccggggtcgtgtcctcgaccaacagcctcgtc
ggcagcactgccggcgatgctattggcgccagtgcggtcacgatattgagcaatggcaac
tatgtggtcatcagctcgtcctgggataacggtcccggcaaagccgacgccggggcggtg
acgtggggcagcggtgcttcaggggtcacggggactatttccgccgtcaacagccttgtc
gggaacaaagctggcgacgccattggcagtagcggcgtgacggcgctgagcaatgggaat
tacgtgatcgccagcccgttctgggacaatgaggcactcggaaacttcgacaccggggct
gcgacctggggcagcggtatcgcgggggtcgtggggaccgtctccaccgtcaacagcctg
gtcgggagcaaaaccggcgacaacgtcagcaatggcggtgtgacggcactgagcactggc
aattacgtggtcgccagcccgttctgggataacggtacgacctcgaatgccggtgccgcg
acgtggggcagcggtacttcaggggttgcggggaccatttccgccacgaatagcctcgtc
ggcacaaccaccagcgacagagtcggaaatgctggggcgacggcgctggcaaacggtaac
tatgtagttgtgagttcgctctggttcaacggcaccggggccgcgacgtggggaatgggg
gcctcgggggttgtaggggccgtctccgcttccaacagccttgtcgggagcgggaccggc
gacaccgttggcagtggcggcgtgacggtactgaccaacggcaattacgtggtctccagt
ccgggttgggacaacggtgccgtcgtcaacgccggagcggcaacgtggggcagcggcgtc
acgggacgtacggggaccatctccgcttccaacagccttgtcggagacaaggcaaacgac
aatgtcggggcagtcgtgacggctctaagcaacggcaattacgtggtctccagtccgggc
tgggacaaaggcgccgtcgtcaacgcaggagcgacaacctggggcaacggcacctcgggg
gccgtgggcatcgtctcggtctccaacagcctcgtgggggccactgccgacgatggcggc
agcagcagcgtgattgcacttggcaacggcaattacgtcgtccgtagcctggtctgggac
aacggcaccgtcgtcaacgccggcgcggcaacgtggggcagcggcaccacggggcgtacg
gggaccatctccgcttccaacagccttgtcgggagcacggccaacgacagtatcgctaac
cttggtgtgacggcactgagcaacggcaactacgtggtctccagttcggcctgggataac
ggcgccatcgccaacgcgtgtgccgtgacttggggcagcggtgccacgggcgtcttcggg
gctatcagtgcttccaacagcgccattggtaccggtgcctcctccggcctccaggccgtt
gtgctggataatatcaacaatacttattttgtgcggtttcttaacgaaggcggcggccgc
gtccgggttggctcgcagttgagtggcttcctgaatcacactcccacgaatatcgcgttg
tccagtagcacgatccccgagaatcagccaggcggccttcccggcattctggttgggaca
ttcagcacgaccgacgaggatctcggagacgtcttcacgtacagcctggtgcccggaaca
gggggcaccgacaacttcaacttctcgattgacccagccgggcatctgatggccccgttc
acttttaactatgaggtcaagaatagctattcgatccgagtccggacgcgggaccaaggc
ggcctcttcttcgagcaggttttcacgattagtgtgacgaacgtcaacgaagcgccgacc
atcgccatgcaagactttttcgtcccggagaatacggggaacggcgtgatcgtcgggacg
gtggtggcaagtgatccggacgcggcggacacgaagaccttcagcattactctggggaat
agtctcggagccttcgcgatcagcgccgcgggcgtgatcaccgtggccgactcgactcgg
ctcgactatgagacgaatccggggttctacctgcaagtgaaggtcacagacgccggcggc
ctgttcgccagcaacatggtgtcgatcctcctgacgaacgtgaacgagacgcccacgaac
atggccctgacggccagctcgatccccgagaaccgaccggtggggacctcggtcggcgcg
ttcaccacgagtgacccggactacgggaacaccttcatatatgcgctggtaagcgggacg
ggcgacaccgacaacgcgagcttcaacatcgacccggccgggcagttgaggtcggcggcg
agcttcgattttgaggccaaaagcagctattccatccgggtgcgcagcaccgaccaaggt
gggctgttcgtcgagcgagttttcacggtcgccgtgaccaacgtgaacgaggcgccgacc
gtcacggccgatgtggcggccgtgaccgtctacgaagggggcaacgcgaccaacagcggc
acattctccgacgtcgaaggtaacaacaccgtcgccgtcacggccagcgtcgggacagtc
acgcagaacaacaccagcgggacgtggagctggtcgctcaatgcggccgacggcccctcg
ggtccgttcaccgtgttcatcaccgcgagggacagccagaacgccgtggcgatcgccacc
ttcatctacacggtcgacaacgtcctgccgaccatctcgctgagcggcaacgccacggtc
gacgaaggctcgccgtacacgctccacctgggcgccgtcaccgatcccggccaagacacc
atcacgagctaccggatcgactggggcgatggcgtcaccaccgacttcaccggcaacccc
gctcacacgacggccacccacacctacgccgacggcccctccacccggacgcacaccgtg
tccgtaaccgacgaagacggcatcgacatcctcgccggcagcctgagcgtgaccgtcaac
aacgtggccccgacagcagtgcttctgaccaatagcgggatcaggtatggcatcgcggca
accgccgccttcaccgacatgttcgatccgtcgatcgtcgacaccgaggccggcctccgc
ttcgtgttctcgatcggcaccgacaccacgggatcggcgacatacgcggggagcagtacg
tccccttcggcgaatttcggcgtcctcaacgcgggctcatacacggtctatgcccgcatc
atcgacaaggacggcggttccaacgtctacacgacgaccatcacggtcggtaaggccgac
gccgtcttctccctcagtggctatgccgtgacctacgacggtacagcgcattccgccagc
gggaccgccaccggtgtgttgggtgaggccctgagcggtctgaacttcgccggcacgacg
cacaccggcgcgatcgcgtcccacaccgccaccgtgaccttcaccgacgtcaccggcaac
tacaacgacgccgctctcctggtccccgtcagcatcgcgaaggcaaacgcggcggtgacg
gtctccgggtacagcggcaagtacgacgcggcatcgcatggcgccaccggaaccgcctcc
ggcgttggcggcaccgacctcgctgcgtacttgagcctgggagcacgcttcaccgacgct
ccaggcgggctcgcccactgggtcttcagcggcggtgcgaactacctcgaccaagcgggt
gacgtcgccatcgctatcgccaaggccgacgcgacgttcagcatcacgccctacgtcggg
gtcacctacgacggcgcggcccacaccgccatcgtcacggccacgggggccgccctcgcg
aacctcagcgctgggctggacctgagcggcaccacccacgtcggcgcggggacgtacgcc
ggcgacgtctggagcttcgcaggtggcaccaactacaacgacgcgagcggcaccgtcgac
aacagcatcgcgaaggccgacgccgttttctccctcagcggctacgccgtgacctacgac
ggcacggcgcactccgctagcgggactgccaccggtgtgatgggtgaggccctgagcggt
ctgaacttcgccggcacgacacacaccggcgcgatcgcgtcccacaccgccaccgtgacc
ttcaccgacgtcaccggcaactacaacgacgccgctctcctggtccccgtcagcatcgcg
aaggcaaacgcggcggtgacggtctccgggtacagcggcaggtacgacgcggcgtcgcac
ggcgccaccggaaccgcctccggcgtaggcggcgccgatcttaccgtgggcctgagcctg
ggagcacgcttcaccgacgctccaggcgggctcgcccactgggtcttcagcggcggtgcg
aactacctcgaccaagcgggtgacgtcgccatcgctattgccaaggccgacgcgacggtt
tccgtcgccggctacagcggcatctacgatgcggcggcacacgggctcgtgggcacggcc
atcggggtgaatggcgagtcgctcggtggattggtctttggaaccggtcgcaccaatgcc
ggcacgagcacggtcgggtggacgttcaccggtggtcggaactaccgggacgcgagcgga
acgcaagacgttgtgatcgcccagcggccgatcaccgtcacggccgacccgcagaccaag
agcaccggccaagccgatcccgacctgacgtaccagatcagtgccggcagcctcgcgggc
aatgacggcctcacgggaagcctgtcacgcgaggccggcgaagctgcgggccgatatgcg
atccgccggggcacgctcgacgcgggaccgaactacgcgatgagcttcgtcggggccgac
ctggtcatcacggtcgcgacttcgagcctctcgggcacggtgttcgtcgacttcaacaaa
gacggccaggtcgacttcggcgagaagggtatcgccggcgcgaccgtccacctcaccggc
accgacgacctgggacgtgccgtggaccaggtcttgcagaccgacctcgacggggcctac
gtcttccggttcctccggcccgggaactatcgtatcaacgagacgcagcccgccgggtat
gcccaggggacgaacacggtgggaacggtcggcggcacggcttccggcgacgccttcgcg
gtgaccctggccgccgacatgaccggcctgaactacaacttcggcgagcggcccgccgcg
accggctcgcttcagcgcggtcagacggcgggcattggcttctggaataacaagaacggc
caggcgttgatcaagtcgctgaacgacggaccgagcagcacccagcttggcaactggctg
gcggccacactccccaacctgtacggcgcaacggccggggcatgcagtctcgctggcaag
acgaacgcacaggtcgccgccttctaccagacccggttcgtgctcaaggggaccaaggtc
gacgcacaggtactgtcctccgcgctgtcggtgtacgtcaccaacgcgacgctcgacagc
acccgcgtcgccgagcgctacgggttcaccgtgacgcagtacggcttcggggccacggga
ctcttcaacgttggcagctacggctcggtgttcggtgtcgtgaacaacaccaccgtgacc
gtgctcgacctgctgatcgcggtcaacgaccgctcggcggccggctcgctgttcaagggc
gacaccttcaagcgactgatcgccgacatcgtgttcggtctgattaacgagatcggcggc
atttga
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