Singulisphaera acidiphila: Sinac_4897
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Entry
Sinac_4897 CDS
T02393
Name
(GenBank) putative HD superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
saci
Singulisphaera acidiphila
Brite
KEGG Orthology (KO) [BR:
saci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saci03019
]
Sinac_4897
Messenger RNA biogenesis [BR:
saci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sinac_4897
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GFIT
Motif
Pfam:
HD
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
AGA29053
UniProt:
L0DJP4
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All DBs
Position
complement(6101784..6102833)
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AA seq
349 aa
AA seq
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MAGTDTAVVRLSDLAHGQEATCFAALIKKDRGVDKHGNPFMKCHFRDKRSTAVAPLWSDN
ALRIQAEAWADGIAYRLRVRGDWKVKYGLQLDIIEIRPATDDDAADGYDFYDLVESTDYD
PETLLASIHDKIERCIDDPYLKRLVEEILSEHGDLFKKMPAAQSFHHSYTAGLLEHVWSM
TRVASFLADHYGNYYEQLNPPLNKGLIVASTILHDIGKLRELEYHPVETKYTKEGCLIGH
VLMGRDLVRETARKIEGFPEETLLLLEHAILAHHGKRDFGAPIVPQTLEALLVSYVDDLD
AKMNIAARQRLNSTNEGEFTDKVYALDNRRLYKGIPREAPVDHDLNELA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggccggcacagacaccgcggtggtcaggctttcggatttggctcatggccaggaggcg
acctgcttcgccgccttgatcaagaaggatcggggagtcgacaagcacggcaacccgttc
atgaagtgccactttcgcgataagcgatcgacggccgtagcgcctctctggtccgacaat
gcgctcagaatccaggcggaggcctgggcagacgggatcgcctatcggttgcgggttcgg
ggcgactggaaggtcaagtacgggctccaactcgacatcatcgagatccgacctgcgacc
gacgacgacgcggccgacggctatgacttctacgacctggtcgagagcaccgactacgac
cccgagaccctgctggcctcgatccacgacaagatcgagcgatgcatcgacgatccctat
ttgaagcggctcgtcgaggagattctgagcgagcacggcgacctcttcaagaagatgccc
gctgcgcagagtttccaccacagctataccgccgggcttctcgaacacgtctggagcatg
acgcgagtggcctccttcctggccgaccactacggcaactactacgagcagctcaacccc
cctttgaacaaagggctgatcgtggcttcgaccattctccacgacatcggcaagctccgg
gagctcgaataccacccggtcgagacgaagtacacgaaggaaggctgcctgatcggccac
gtcctgatgggccgggaccttgtccgcgagaccgcgcggaagattgaagggttccctgag
gaaacgttgctcctcctggagcatgccatcctcgcgcatcatggcaaacgcgacttcgga
gcgccgatcgttccgcaaacgctcgaggcgctcctggtttcgtacgtggacgatctcgat
gcgaagatgaacattgcggcccggcaacggctcaactccaccaatgaaggggagtttacc
gacaaggtctacgccctggacaatcgccgactctacaagggaatcccacgcgaagcgccc
gtggaccacgacttgaacgagttggcctga
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