Singulisphaera acidiphila: Sinac_5473
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Entry
Sinac_5473 CDS
T02393
Name
(GenBank) PDK repeat-containing protein
KO
K20276
large repetitive protein
Organism
saci
Singulisphaera acidiphila
Pathway
saci02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
saci00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sinac_5473
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
K319L-like_PKD
AGA-YXIM_GBD
Y_Y_Y
SprB
Planc_extracel
Motif
Other DBs
NCBI-ProteinID:
AGA29619
UniProt:
L0DJQ1
LinkDB
All DBs
Position
complement(6841706..6846250)
Genome browser
AA seq
1514 aa
AA seq
DB search
MTKPSWRSFLRSKCKEVSTNKLRLQVEALEDRHLMATGAATLPIDFGKIGSAVIPGTIPL
SKAAPYSPTLGYGWETSVKATAQAISAPRQRGSISDSENNFRVDLPNGLYHVTVAVGDPR
LRNRLSIWAEGQPVSLVQRVTSRQFAQPSFQVAVTDGQLHLKFANSGKTRLNLKPNALTI
QPVLLASAGADMIAKEGDKVTFSGQTSGGAGATYAWDFGDGEKATGSLTPEHVYRDNKTY
TATLLVTDPSGATVQSSTTVNVANVAPTASVSGPYNATAGKAITLTGAATDPSPIDTAAG
FIYTWNFGDGTPNISGKGLTNPSHVYAKPGTYTVLVAATDKDNATSLAASTIVNVTKPPD
PILTASAGGSYSSLEGATKTFTATAAGGNGIYTYTWDLDNNGTYETAGQTVASTFLDNGI
YIVNLRVTDSAGQVALASATVNVANVAPTASVSGPYNATAGKAITLTGAATDPSPIDTAA
GFIYTWNFGDGTPNISGKGLTNPSHVYAKPGTYTILVTATDKDNATSPAASTIVNVAKAP
DPILTASAGGPYSSLEGATKTFTATAAGGNGIYTYTWDLDNNGTYEAVGQTVASTFLDNG
IYIVNLRVTDSAGQVALASATVNVANVAPTASVSGPYNATAGKAITLTGAATDPSPIDTA
AGFIYTWNFGDGTPNISGKGLTNPSHVYAKPGTYTILVTATDKDNATSPAASTIVNVAKA
PDPILTASAGGPYSSLEGATKTFTATAAGGNGIYTYTWDLDNNGTYEAVGQTAASTFLDN
GIYIVNLRVTDSAGQVALASATVNVANVAPTVFGSGSYSAFLGQTLTLHASATDPSPVDT
AAGFIYTWDFGDGSAPISGLGLTSPSHVYTTAGEYTATVTATDKDGGVSPMIFTMVTIFS
LSPVNGLANLVLTPGWATFGQVLPQGVAHDGLQLGNLVTQTDVKTTWPDGSIRYAIVSAA
VPVTGTYVLTEATPRVGSFIPTIPDASVRLTIGGVLYTATLPKAKSSDLWLNGPLVTEWR
TTVAPVDPAGKPHPFLRVIFDTRSYQDGPDRLDVTVENVLDVAGATKVDYDVSIAAGGQT
LFSQAGVTQYYLTRWRKVFDLGLNESQVIHDFEPFYEAGALPRYLDTITNQTYSTTGDTF
NILGRGGNTYDAMGAAGGRPELAPYPDWAAQYLVYQTASQQDYTLANGTLAGSWPVHIRE
ADGSLVSIDNRPNFWLDTRGQGPYSYVPVSDQPKGDLTAASTGPLTPDLAHVPSLAYIPY
LVTGDRYLADEVAFWGNIGLIKSWQAAVSNGPTLGGRGGALGIVGTEQVRARAWALRNLV
DAAAYLPNADPAKNYFSAKVKNNLDYYNTYAQNHVTPLGTVFEQPMYTTSPDMSVWMNNY
LAWSIDHANEQGFTGGLLLRNRIVDFQLKLFTSGPAYAREQAAPYYLTVGRILPGGTWEY
FATMDDLFKQNFGTTQSTERPFTGYYGTDARITLILAANQGLAGAQDAYDWLTPQILSDI
KSRSGWAIAQKKPQ
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaccatcttggcggagcttcctacgatcgaagtgcaaggaagtctcgacgaac
aagctccgattgcaggtcgaggccctcgaagaccgacaccttatggccacgggggccgct
acgctcccaatcgatttcggcaagattggttctgccgttattccagggacaatcccctta
tccaaggcggccccctatagcccaacgctgggctacggttgggagacctccgtcaaggca
accgcccaagccatttccgccccgcgacagcgcggttccatttcggactccgaaaacaac
ttccgcgtggatttgcccaacggcctttatcacgtgaccgtcgccgtgggagatccacga
cttcgaaatcgcctctccatctgggctgagggacagccggtaagcttggtgcagcgggtc
acctcccggcaattcgcgcaaccgagctttcaggtcgccgtgaccgatgggcaactccac
ctgaagttcgcgaatagcggcaaaacgcgtttgaatttaaagcccaacgcgctgacgatt
caacccgtcctgctcgcatccgccggcgcagacatgatcgccaaagagggcgacaaggtc
accttctcagggcagacctccggtggtgccggtgcgacctatgcctgggacttcggtgac
ggcgaaaaagccaccggctcactgacccctgagcatgtttatcgggacaacaagacctac
acggccacgctccttgtgaccgatccctccggagccacggtccaatcgtccacgacggtc
aacgtcgccaacgtggctcccacagcctcagtcagcgggccctacaacgctaccgccggc
aaggcaatcacactgaccggagcggccactgacccaagcccaatcgacaccgccgccggc
ttcatctacacctggaacttcggcgatggaacgccaaatatcagcggcaagggactcact
aacccaagccatgtctacgccaaacctggtacttacaccgtcctcgtcgccgctactgac
aaggacaacgccacaagtctcgctgcatccaccatcgtcaacgtcaccaagccccctgac
cccatcctcaccgcctctgcgggaggctcctattccagtcttgaaggcgcaaccaagacg
ttcaccgccaccgctgcaggcggaaacggaatctacacgtacacctgggacctcgataac
aacggaacctacgagaccgctgggcagactgttgcatccaccttcctcgataacggaatc
tacatcgtcaacctccgcgtgaccgactccgcgggccaagtcgcactcgcctccgctacg
gtcaacgtcgccaacgtggctcccacggcctcagtcagtggaccctacaacgctacggcc
ggcaaggcaatcacactgaccggagcggccactgacccaagcccaatcgacaccgccgcc
ggcttcatctacacctggaactttggcgacggaacaccgaatatcagcggcaagggactc
accaacccgagccatgtctatgccaaacctggcacttacaccatcctcgtcaccgctact
gacaaggacaacgccacaagtcccgccgcatccaccatcgtcaacgtcgccaaagcccct
gaccccatcctcaccgcctctgcgggggggccctactccagtctcgagggcgcaaccaag
acgttcaccgccactgctgcgggcggaaatggaatctacacctatacctgggacctcgat
aacaacgggacctacgaggccgtcgggcagaccgtcgcatccaccttcctcgacaacgga
atctacatcgtcaacctccgcgtgaccgactccgcgggccaagtcgcactcgcctctgca
accgtcaatgtcgccaacgtggcccccacagcctcggtcagtgggccctacaacgctacc
gccggcaaggcaatcacgctgaccggagcggccaccgacccaagcccaatcgacaccgcc
gccggcttcatctacacctggaactttggcgacggaacaccgaatatcagcggcaaggga
ctcaccaacccaagccatgtctacgccaaacctggtacttacaccatcctcgtcaccgcc
accgacaaggacaacgccacaagtcccgccgcatccaccatcgtcaacgtcgccaaagcc
cctgaccccatcctcaccgcctctgcgggggggccctactccagtctcgagggcgcaacc
aagacgttcaccgccactgctgcgggcggaaatggaatctacacctatacctgggacctc
gataacaacgggacctacgaggccgtcgggcagaccgccgcatccaccttcctcgacaac
ggaatctacatcgtcaacctccgcgtgaccgattccgcaggccaagtcgcactcgcctcc
gctacggtcaacgtcgccaacgtggctcccaccgtcttcggaagtgggtcctactcagca
ttcttgggacagaccctgacacttcatgcctcggccaccgacccaagcccggtcgatact
gcggccggtttcatctatacttgggacttcggcgacggttcggccccgatcagcggcctg
gggctgaccagtcccagccacgtgtacacaacggcgggagagtacacggcaacggtgact
gccaccgataaggatggaggggttagcccaatgattttcaccatggtcaccattttcagc
ctgagcccggtcaatggattggcaaatctcgtcctgacccccggctgggccaccttcggc
caggttttaccacaaggtgtcgcccatgatggcttgcaactcggaaacctggtgacccag
accgacgtcaagaccacctggcccgacggctcgattcgctatgccatcgtcagcgccgcg
gtgcctgtgacgggtacctacgtactcactgaggccaccccgcgtgtcggcagtttcatt
ccgacgatcccggacgcgtccgtccggttgaccatcggcggagtcctttacaccgcgacc
ctcccgaaagcgaagtcgagcgatctctggctcaacggacctctcgtgacagagtggcgc
acgaccgtcgcccctgtcgacccggccggcaaaccccatcccttcctgcgagtcatcttc
gacacgcggtcttatcaggacggcccagatcggctggacgtgaccgtcgagaacgtcctt
gatgtggccggggcgacgaaggtcgactatgacgtgagcatcgccgccggaggacaaacg
ctctttagccaggccggcgtgacccagtactacctgacccgctggcgcaaggtcttcgac
cttggcctgaacgagtcgcaggtgatccatgatttcgagccgttctacgaggccggtgcc
ctgccacgctacctggacacaatcacaaatcagacctattcgaccacgggtgataccttc
aatatcctcgggcgtggcggcaatacttacgatgccatgggggccgcaggcggccgaccc
gagcttgccccctaccccgactgggcggcgcagtacctggtctatcaaacggccagccag
caggactacacacttgcgaatggaacgctcgccggatcttggccggttcacattcgcgag
gctgacggcagccttgtctcgatcgacaaccgccccaacttctggctcgatacgcggggg
caagggccgtattcgtatgtcccggtcagtgaccagcccaaaggtgatctcaccgccgcc
agcactggcccgctgacgcccgatttggcgcacgtgccgtccctggcttacatcccttat
ctggtcacgggcgatcgttacttggccgacgaggtagcgttctgggggaacattggcctg
atcaaatcctggcaagccgccgtctcgaatgggccgacgctcggcgggcggggaggcgcg
ttgggaatcgtcggcacagagcaagtaagagcaagggcgtgggccttgaggaacctggtc
gacgctgccgcttacctgcccaatgcggaccctgcgaagaactacttcagcgccaaggtc
aagaacaaccttgactattacaatacctacgctcagaaccacgtgactccgttggggacg
gttttcgagcagcccatgtacaccacctcgccggacatgagcgtgtggatgaataactac
ttggcatggtcgatcgatcacgccaatgagcagggctttaccggaggcctgctcctgaga
aaccgaatcgttgatttccagctcaaactgttcaccagtggtccggcctatgctcgcgag
caagccgcaccttactacctgactgtcgggcgcatcctgccgggaggtacttgggagtac
ttcgcaacgatggatgatcttttcaaacagaattttggcaccacccaaagcaccgagcgt
ccattcactgggtactatggcacggacgcacggattacgctcattttggcagcgaaccag
ggtctggccggggcacaagatgcctatgactggctcacgccgcagatcctgagcgatatc
aagagtcgatcgggatgggcaatcgctcagaagaaaccacagtga
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