Singulisphaera acidiphila: Sinac_5515
Help
Entry
Sinac_5515 CDS
T02393
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
saci
Singulisphaera acidiphila
Pathway
saci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sinac_5515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saci03019
]
Sinac_5515
03009 Ribosome biogenesis [BR:
saci03009
]
Sinac_5515
Enzymes [BR:
saci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Sinac_5515
Messenger RNA biogenesis [BR:
saci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Sinac_5515
Ribosome biogenesis [BR:
saci03009
]
Prokaryotic type
rRNA helicases
Sinac_5515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
AGA29656
UniProt:
L0DLV5
LinkDB
All DBs
Position
6899886..6901133
Genome browser
AA seq
415 aa
AA seq
DB search
MIQRAVEESLPGFQSMGLSAPLLRALKKVRYHTPSPIQAELIPEALEGRDVIGQAKTGTG
KTAAFGIPLIEMLEARGKGPQGIILAPTRELVQQIVAELQTLADGQDVVICGIYGGEPID
KQLRALQRGVDLIVGTPGRVLDHIERRTLYLGDIYHVVLDEADRMLDIGFRPDIERILRK
VPNPHQTLLLSATISPDIRKLAQRYMFEPVELNLSRDEPSVDSIKQYYVTVEHERKFDLL
VHLLQRDRPRQCIVFTRTKRGAERLADRLRGRIPGVATIHGDLAQTVRNRVMLGFRNGTI
PVLVATDVVGRGIDVNDISHVINFDVPDDAENYVHRIGRTGRMGKDGLAYMFVCPDQGEP
LTAIENLINKTIPTLPLDGFEAYRRQPKRETAFKEIYSTAATRSPYGAVSSRENV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
ttgattcaacgtgcagttgaggagtcccttcccgggtttcaatcgatggggctaagtgcc
ccgctgttgcgggctttaaagaaggtccgttaccacaccccttcgccgattcaggcggaa
ttgattcccgaggctctcgaaggtcgcgacgtgatcggccaggccaagacgggcactggc
aaaaccgcggcatttggcatccccctcattgagatgctcgaggcacgcggcaagggtccc
caggggattatcctggcgccgactcgcgaactcgtccagcagatcgtcgccgagttacag
acactcgccgatggtcaagatgttgtcatttgcggaatctatggcggcgagcctatcgac
aagcagcttcgcgcgttgcagcgtggtgttgacctgatcgtgggaactcctggccgtgtg
ctcgatcacatcgagcgacgtacgctctacctgggcgacatttaccacgtcgttctcgat
gaagccgaccggatgctggatatcggcttccgccccgacatcgagcgaatccttcgcaag
gtcccgaatccgcatcagaccttgcttctttcggcgaccatcagccccgacattcgtaaa
cttgctcagcggtacatgtttgaaccggtcgagctcaacctgtcgcgggatgaaccctcg
gtcgattcgatcaagcagtactacgtcaccgtcgagcacgaacgaaagttcgacctgctc
gtccatctgcttcagcgcgaccggccgcgtcagtgcatcgtctttaccaggacgaagcgc
ggggcggaacgactcgccgaccgtcttcgcggccggatccccggggtggcgaccattcat
ggcgacctcgcacagaccgttcgcaaccgagtgatgctcgggtttcgcaacgggacgatt
cctgtcctcgtggcgactgatgttgtgggacgcggtatcgatgtcaacgacatcagccac
gtcattaacttcgacgttcctgacgatgccgaaaactatgtccatcggatcggtcgtacg
ggccggatgggcaaagacggtctcgcttacatgttcgtctgccccgatcagggcgaaccc
ctgaccgcaattgagaatctgatcaacaagacgatcccgacacttcctctcgacgggttc
gaggcctaccggcggcagcccaagagggaaaccgctttcaaagagatttacagcacggcg
gcgacccgctctccgtatggtgccgtgagctctcgcgagaacgtctga
DBGET
integrated database retrieval system
