Singulisphaera acidiphila: Sinac_6783
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Entry
Sinac_6783 CDS
T02393
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
saci
Singulisphaera acidiphila
Pathway
saci03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
saci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sinac_6783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saci03400
]
Sinac_6783
DNA repair and recombination proteins [BR:
saci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sinac_6783
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sinac_6783
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
P-loop_SecA
AAA
Kinesin
Microtub_bd
TNIP1_N
TFIIA
Motif
Other DBs
NCBI-ProteinID:
AGA30850
UniProt:
L0DPU4
LinkDB
All DBs
Position
8562392..8564476
Genome browser
AA seq
694 aa
AA seq
DB search
MPDFQLVSPYQPAGDQPKAIAELTQGLRDGHKHQTLLGVTGSGKTFTMANVIAQMNRPAL
VMSHNKTLAGQLYGEFKAFFPHNAVRYFVSYYDYYQPEAYIPQRDIYIEKDASINDEIER
LRLAATSALVSRNDVIVIASVSCIYGLGSPEDYRKMMVRLKVGENIDRDEMLLRLVDIQY
DRNDISFERGKFRVRGDVVEIWPAYEEIAFRIELFGDEIETLSVIDPLTGSVIEKKDDMY
IYPAKHFVLPEDRIQGAVERIQEELKERLKMLRDQGKLLEAQRLEARTRYDVEMLLEVGY
CSGIENYSRPLAGKKAGETPNTLLDFFPPDSLLFIDESHVSVPQIRGMFAGDFSRKSTLV
EHGFRLPSALDNRPLRFDEWELKLGSRVYVSATPGDYEVAMSGGEVVEQVIRPTGLIDPV
VRIEPARGQVPALVAEVKTRAARGERVLVTTLTKRMAEDLSRFMKEQGLRCKWLHSELNA
IERMTILRELREGAFDTLIGVNLLREGLDLPEVSMVCILDADKEGFLRSETSLIQTIGRA
ARHVNAEVVLYADKVTQSMQRALDETNRRRALQLAYNAEHGITPESIVKSIRRGIEEEMQ
AKVETRKAVGRDETTDATEEYLNELEAEMLAAAENLEFERAAALRDRILQLRSSQGGGPA
RPLASAQATSAKAKAKSKAKAGGGRGGRKPKTEQ
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgccagatttccagttggtgtccccctatcaaccggccggtgaccagcccaaggcgatc
gccgaactgacgcaagggctgcgtgacgggcacaagcaccagacgctcctcggcgtgacc
ggctcgggcaagacattcacgatggcgaacgtgatcgcccagatgaatcgcccggccctc
gtgatgtcgcacaacaagacgctcgcgggccaactctacggtgagttcaaagcgttcttc
ccccacaacgccgtccgctatttcgtcagctactacgactactatcaacccgaagcctac
atcccccagcgcgacatctacatcgagaaggatgcctcgatcaacgacgagatcgaacgg
cttcgcctggcggccaccagcgccctggtcagccgcaacgacgtgatcgtcatcgccagc
gtctcatgcatctacggcctcggttcccccgaggattaccgcaagatgatggtccgcctc
aaggtgggcgagaacatcgaccgcgatgagatgcttctccgcctggtcgatatccagtac
gaccgcaacgacatcagcttcgaacgcggtaagttccgggtccggggcgacgtcgtcgag
atctggccggcctacgaggagatcgccttccggatcgaactcttcggcgacgagatcgaa
actctctccgtgatcgacccactcaccggctcggtcatcgagaaaaaagacgacatgtac
atctatccggccaagcacttcgtcttgccggaagaccggatccagggggccgtcgagcgg
atccaggaggagctcaaagagcggctcaagatgctccgcgatcagggcaagcttctcgag
gcgcaacgcctcgaagcgcgaacccggtacgatgtcgagatgctcctggaggttggctac
tgctcgggcatcgagaactacagccggccgctcgccggcaagaaagcgggcgagacccca
aacaccctcctcgacttctttccccccgacagcctcctcttcatcgacgagtcacacgtc
agcgtcccccagatccgcgggatgttcgcgggggatttcagtcgcaagagcacccttgtg
gagcacggctttcgcctccccagcgccctggacaaccggccgctccggttcgacgagtgg
gagctcaagctggggtcgcgcgtctacgtctcggcgacccccggcgactatgaagtggcg
atgtcagggggcgaggtcgtcgagcaagtgatccgcccgaccggcctgatcgacccggtc
gtccgcatcgagcccgcgcgaggccaggtccccgcgcttgtggccgaagtcaaaacgcgg
gccgcgcgaggcgaacgagtcctggtcacgacgctgaccaagcgcatggccgaagacctc
tcgcggttcatgaaggagcaaggcctgcgctgcaagtggctgcactccgaactcaacgcg
atcgaacggatgaccatcctccgcgaactccgcgaaggggcgttcgacaccctgatcggc
gtcaacctactccgcgaagggctcgacctgcccgaagtctcgatggtctgtatcctcgac
gccgacaaagaaggcttcctccggagtgagacctccctgatccagacgatcggccgcgct
gcccgacacgtcaatgccgaggtcgtgctctatgccgacaaggtcacgcagtcgatgcag
cgagccctggacgagaccaatcgccggcgtgccttgcagcttgcctataacgccgagcac
ggcatcacccccgaatccatcgtcaagtcgatccgacgcggcatcgaagaagagatgcaa
gccaaggtcgagacccgcaaggcggtcggccgtgatgaaacgaccgacgccaccgaggaa
tatctgaacgagcttgaggccgagatgctcgccgcagccgagaacctcgagttcgaacgc
gcggcggcccttcgcgatcggatcctccagctcaggtcgagccagggggggggccccgct
cgaccccttgcctcggcccaggccaccagcgccaaggccaaagccaagtcgaaagcgaag
gccggtggtggtcgcggcgggcggaagcccaaaaccgagcaataa
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