Singulisphaera acidiphila: Sinac_7544
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Entry
Sinac_7544 CDS
T02393
Name
(GenBank) PAS domain S-box
Organism
saci
Singulisphaera acidiphila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
PAS_4
PAS
HATPase_c
PAS_9
HisKA
PAS_3
GAF_2
Hpt
PAS_8
GAF
PAS_7
PAS_10
bHLH-MYC_N
LysR_substrate
HATPase_c_3
YxiF
GRIP
Motif
Other DBs
NCBI-ProteinID:
AGA31577
UniProt:
L0DRH4
LinkDB
All DBs
Position
complement(9601817..9606376)
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AA seq
1519 aa
AA seq
DB search
MSMSVRLRSLNDSWFYARAAGAVVIVMSGLVLVGRTFDFGVLKSVIPGAIAMNPGGAALA
FLLAGAALYTRASEGVSSRRRRALGIACAVGVVLIGLSRLGGYLTGWDGGADPLLFHAKL
DLEALPFGHSNGMTPNTAAAFVLVGLALATLDATLLRRRIWPAQYLALAAGLIALMALIG
YAFRATALFGVRAIIPMGLNTAIGFVILCFGILCSRPDRGLMAVIRSPGAGGGMARRMLP
TAFLIPVAVGWVRWLGQRAGVVDPVMGLSLFVLADILVFTALVWWTAASLDLMDRERRRA
ERRLGVQHTATRVLAESPRLEDAVPGILQAICESLDWSVGVMWWVDAEENVLRCSNLWHS
PSVQVDEFAALSRRIAFAPGVGLPGRVWATGQTAWIPDVVEDANFPRAAVAVREGLHGAF
GFPVVVGNDILGVVEVFSGEIQNPDRELLQMLVAIGSQIGQFMKRKQAEEVVHHERFLLH
SLMDNVPDSIYFKDVGGRFISINQAMANQFGLSDPAEAVGKTDFDFFDEEHARQAWEDEQ
AIMQAGQPVVGKEERETWGSSGRHAWASTTKMPFRDKDGRIIGTFGISRDITAWKQAEEA
LRQGEERFRSLVEATVAIVWNTPESGEFETEQPGWSAFTGQTFDELKGWGWLNAVHPDDR
ATTTQVWTAAIASRRLYQVEHRLRRYDGKYRHMLVRAVPVLAKDGGIREWIGVHTDVDPE
KKAEAALREAEERVRLLLESSGEGIYGINTQGQCTVINRAAAAMLGYPVAEVLGQKLHPL
IHHSHPDGSPYSEADCRIYRSFRVGESSRVDDEVLWRRDGTAFPVEYSSYPLRGGDGQIK
GAVVSFTDITERKKVERELVRATEAAQAATQAKSEFLANMSHEIRTPLNGIIGMTELALD
TELTPDQQEYLGMVKLSADHLLTVINDILDFSKIEAGKLDLDIIDFHLRDALDDTMATLA
MRAHKKGLELADHVAADVPDVLVGDPHRLCQVVVNLIGNAIKFTERGEAVLRVEVQSRSE
QGVSLHFAVSDTGIGIPPEQQQKLFKAFSQADTSTTRKYGGTGLGLAISARLVQLMGGEI
WLESQAGQGSIFHFTLPFGLVCGPVARARPVEPEQVHGLPVLIVDDNATNRRILEEMLTN
WGMKPTTVAGGREAIATLAEARGAGRPFALVLLDAMMPGMDGFTLAEQIKQDSALTGSTL
MMLSSANRREDAARCQELGVATYLMKPIRESSLLDAIMTTLGASMSDEPYGAQPAAPAMP
NGSRRTWKRMLRLLLAEDNAINQRLAMALLKKQGHQVVVVNNGREALAAMNGSRFDAVLM
DVQMPEMDGFEATAAIRSREAGTGVHTTIIAMTAHALKGDRDRCLDAGMDAYVSKPLRLE
DLLGVLEGLTPVSRETGGSPAGSGVGTFDMAAALERVDGDASLLKELAGLFLDEAPQRMA
EIRQAITQRDATTLQREAHTLKGSVGNFGARDAFEAARRLENIGLEQHWGQVEETWSVLE
EAIGRLNAAFTGLCQEGVS
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgtctgttcgtttgcgcagtctgaatgactcttggttttatgcacgcgcggcc
ggcgccgtcgtgatcgtgatgagcggcctggtgttggtggggcggacgttcgatttcggg
gtgttgaagagcgtcatccccggggcgattgccatgaatcccggaggggcggccttggcc
ttcctgctcgccggggcggcgctgtatacgcgggcgtcggagggggtgtcgtcccgccgt
cggcgcgccttggggatcgcatgcgcggtgggcgtggtgctgataggcctgtcgcggttg
ggaggctacctcacgggttgggacgggggggctgacccactgttatttcacgcgaagctg
gatttggaggcattgccgttcggccattccaacgggatgacgcccaatacggccgcggcg
ttcgtactcgtcgggctggcgttggcgacgctcgatgcgacgctccttcgccgcaggatt
tggcctgcccaatatctcgctttggcagcgggcctgatcgcgctgatggccctgattggc
tatgcctttcgcgccactgcactgttcggtgtgagagcgatcattccgatggggctgaac
accgcgatcggattcgtgatcctctgctttggcattctctgttcgcgtcctgaccgcggg
ctgatggccgtgattcgcagcccaggcgccggcggcggcatggcgcggcggatgctgccg
acggcgttcctgatcccggtggccgtcgggtgggtgcggtggcttggccagcgggcgggc
gtggtcgacccggtcatggggctgtcgctgttcgttctggccgacatcctggtcttcacg
gccttggtctggtggaccgcggcatcgcttgacctcatggaccgcgagcggaggcgggcg
gagcggcgcctgggagtgcagcacacggcgacccgcgtcctggcggaatcgccacggctc
gaagacgcggtgccggggatcctccaggcgatctgcgaaagcctggactggtcggtaggc
gtcatgtggtgggtggacgcggaggagaacgttctgcgttgcagcaacctgtggcattcg
ccgtcggtccaggtggatgagttcgcagccctgagccggcggattgcgttcgctcccgga
gtcgggcttcccggccgggtctgggcgaccggacagaccgcctggatcccggatgtcgtc
gaggacgccaatttcccgagggcggcggtggccgtccgcgaggggcttcatggcgccttc
gggttcccggtcgtcgtcggcaacgacatccttggcgtcgtggaggtcttcagcggcgag
attcagaatcccgacagggaactgctccagatgctggttgccatcggcagtcagatcggc
cagttcatgaaacggaagcaggcggaggaggtggtccaccatgaacgattcttgctccac
tcgctcatggataacgtccctgactcgatctacttcaaggatgtcggcgggcgcttcatc
agcatcaatcaggcgatggccaaccagttcggcctgagcgaccctgccgaggcggtgggc
aagacggatttcgacttcttcgacgaggagcatgctcgtcaggcctgggaagacgaacag
gccatcatgcaggccgggcagcctgtcgtcggcaaggaagaaagagagacatggggaagc
agcggacgccacgcctgggcttccacgaccaagatgccgtttcgggacaaggacgggcgg
atcatcggcacgttcggcatctcgcgcgacatcaccgcgtggaagcaggccgaggaggcg
ctccgccagggagaggagcggttccggtctctggtcgaagcgaccgtcgccatcgtttgg
aacactccggagtccggcgagttcgagaccgagcagcccggctggagcgcgttcaccggc
cagacgttcgacgaactcaaagggtggggctggctcaatgccgtccaccccgacgaccgg
gcgaccaccacccaggtttggacggcagcgatcgcttcccgccgtctctaccaggtcgag
catcggctacggcgatatgacggaaaataccggcatatgctggtgcgggctgttcccgtc
ctggccaaggatggggggattcgggagtggatcggagttcacaccgacgttgatcccgag
aaaaaggctgaggctgcattgcgggaggcggaggaacgggtccgcctgctccttgaatct
tcgggcgagggaatctatggaatcaatacgcaaggccagtgcactgtgatcaaccgggcg
gcggcagcgatgcttggctaccccgtcgcagaagtgcttggccagaaactccatcccttg
attcaccactcccaccccgacggttcaccctattccgaagcggactgtcggatctaccga
tcgtttcgagtcggtgagtcgagccgggtggacgacgaggtgttgtggcggcgagacggg
acggcgttcccggtcgaatactcctcgtaccccttgcgcgggggggacgggcagatcaaa
ggggccgtcgtcagcttcacggacatcaccgaacggaaaaaggtggagcgcgagttagtg
cgggccacggaggctgctcaggccgccacccaggcgaagagcgaattcctggcgaatatg
agccatgagattcggacgcctctgaatgggatcatcggcatgaccgagcttgcgctggat
acggaactcactcccgaccagcaggagtacctcgggatggtgaagttgtcggccgaccac
ctgctcacggtgatcaacgacatcctcgacttctccaagatcgaggccggtaagctcgac
ctcgatatcatcgacttccaccttcgcgacgcccttgacgacaccatggcgacgctcgcg
atgcgtgcccacaagaaagggctggagttagccgaccatgttgcggccgacgtaccggac
gtcttggtgggcgatccgcaccgcctctgccaggttgtcgtcaacctgatcggtaacgcc
atcaaattcacggaacggggagaggcggtgctccgggtcgaagtgcagtcacggagcgag
cagggggtgagcctccactttgcggtcagcgacacgggcattgggattccccccgagcag
cagcagaaactcttcaaggccttctcccaggccgacacgtccaccacccgcaagtacggt
ggcacggggttgggcttggcgatctcggcccggctggtccaattgatgggcggggaaatt
tggctggagagtcaggcgggccaggggagcatcttccacttcacgctccccttcggcctg
gtgtgtggcccggtggcgcgggcgagaccggtggaacccgaacaggtgcatggcctgccc
gtcctgatcgtcgacgacaacgccacgaaccggcggatccttgaggaaatgctcactaac
tggggcatgaagccgaccacagtcgcggggggccgggaagcgatcgccaccttggcagag
gcgcggggggccggtcggccgttcgccctggtgctcctcgatgccatgatgcccgggatg
gacggctttaccctcgccgagcagatcaagcaggactcggcgctgacgggatcgaccctc
atgatgctgtcgtcggccaaccgacgcgaggatgcggcccgctgccaggagttgggggtg
gccacctatctgatgaaaccaatccgggaatcgtcgcttttggatgcgattatgaccacc
ctcggcgcttccatgagcgacgagccgtacggcgcccagccggcggcccccgctatgcct
aatggaagccggcggacgtggaagcggatgctccggctcttgctggccgaggacaatgcg
atcaaccagcggttggcgatggcgctgctgaagaaacaggggcatcaggtcgtggtcgtg
aacaacggtcgcgaggcgctcgccgcgatgaacggctcacggttcgacgcggtgctgatg
gacgtgcaaatgccggagatggacgggttcgaggcaactgccgcgatccggtcacgcgag
gcggggacgggtgtccatacaacgatcatcgccatgaccgcccacgctctgaagggagac
cgggatcgctgtctggatgcaggtatggatgcttatgtttccaagcccctccggctggag
gatctgttgggggtcttggaagggctgacgccggtctcccgcgagaccggaggctcgccg
gccgggtccggagtcgggacatttgacatggccgcggctctggaacgcgtggacggggat
gcctcgctcttgaaggaattggcggggctctttctcgacgaagctccgcagcggatggcg
gagatccggcaggcgatcacccagcgggatgccacgacgcttcagcgtgaggcgcacacg
ctcaaagggtcggtgggcaacttcggggcccgcgacgccttcgaggcggcgcggcggctg
gagaacatcgggcttgagcagcactggggtcaggtggaggagacctggtccgtgctggag
gaagccattggccgtctcaacgcggccttcaccggactctgccaggagggggtgtcgtag
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