Streptococcus acidominimus: SAME_00288
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Entry
SAME_00288 CDS
T08039
Symbol
polC_2
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
saco
Streptococcus acidominimus
Pathway
saco03030
DNA replication
saco03430
Mismatch repair
saco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAME_00288 (polC_2)
03430 Mismatch repair
SAME_00288 (polC_2)
03440 Homologous recombination
SAME_00288 (polC_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saco03032
]
SAME_00288 (polC_2)
03400 DNA repair and recombination proteins [BR:
saco03400
]
SAME_00288 (polC_2)
Enzymes [BR:
saco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAME_00288 (polC_2)
DNA replication proteins [BR:
saco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAME_00288 (polC_2)
DNA repair and recombination proteins [BR:
saco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAME_00288 (polC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DNA_pol_B_exo2
Motif
Other DBs
NCBI-ProteinID:
SNV33907
UniProt:
A0A239WHG0
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All DBs
Position
1:279237..279824
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AA seq
195 aa
AA seq
DB search
MENLDQYVAFDLEFNTVNDISHIIQLSAVKFVDHEEVAHFDTYVYSEVPLQSFINGLTGI
TSEKIAHAPKLEQVLADFADFVNGTSLVGYNAHKSDLPILAENGLDLTAQYALDLYDEAF
ERRSSDLNGIANLKLQTVADFLGIKGKGHDSLEDARMTALIYETFLEFDSNKSYLSQQQE
SHGDNPFAALGGLFD
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctagaccaatacgtagcctttgatttagaattcaatacagtaaatgacatc
agccatattattcagttatcggcggttaagtttgttgaccatgaggaagtggcgcatttt
gatacttatgtctatagtgaggtgcccttgcaaagttttattaatggcttgacagggatt
acgtctgagaaaattgcgcatgcacccaaattagagcaagtgctggcagattttgcagat
ttcgttaatggcacttctttagttggttacaatgcacataagtcggatttaccgatttta
gctgagaatggtttagacttgaccgctcagtatgcccttgatttgtatgatgaagctttt
gaacgtagaagtagtgatttgaatggcattgctaatcttaagttacagacggttgcagat
tttcttggtattaaaggaaaaggtcacgatagtttggaggacgcgcgtatgaccgctctt
atctatgaaacatttctagagtttgatagtaataagtcttacttatctcagcagcaggaa
agtcatggggataatccgtttgctgctctaggtggtttgtttgattga
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