Streptococcus acidominimus: SAME_00343
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Entry
SAME_00343 CDS
T08039
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
saco
Streptococcus acidominimus
Pathway
saco03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
saco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAME_00343 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saco03021
]
SAME_00343 (rpoE)
03400 DNA repair and recombination proteins [BR:
saco03400
]
SAME_00343 (rpoE)
Transcription machinery [BR:
saco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAME_00343 (rpoE)
DNA repair and recombination proteins [BR:
saco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAME_00343 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
SNV34358
UniProt:
A0A239WKE3
LinkDB
All DBs
Position
1:331006..331584
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AA seq
192 aa
AA seq
DB search
MELDVFAGQEKSELSMIEVARAILEERGRDNEMYFSDMVNEIQVYLGKTDAEIRESLPYF
YSDLNIDGSFIPLGDNRWGLRSWYAIDEIDEEILTFEEEGEDAPKRKKKRVNAFMDGDED
AIDYNDDDPEDEDYTDEASDIEYDEENPDDEKSEVESYDSELNEIIADDDVDEDVELNEE
DDDFADDDEVEE
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
ttggaattagacgtatttgctggtcaggaaaagagcgaactttcaatgattgaagttgct
cgtgcaattttagaagaacgtggtcgtgacaatgagatgtatttcagcgacatggtcaat
gaaatccaagtctatcttggaaagactgatgccgaaattcgtgagtcacttccctatttt
tactcagatttaaatattgatggtagttttatcccccttggtgataaccgttggggcctt
cgctcatggtatgctatcgatgagattgatgaggaaatcttaaccttcgaagaagaggga
gaagatgcaccaaaacgcaagaaaaaacgcgttaatgccttcatggatggtgatgaggat
gccattgattacaatgatgatgatccagaagatgaagattacacagatgaagcatcagat
attgagtacgatgaagaaaacccagacgatgaaaaatctgaggtggaatcatacgattct
gagttgaatgaaattatcgctgatgatgacgtggatgaagacgttgaactcaatgaagaa
gatgatgattttgcggatgatgatgaggtagaagagtaa
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