Streptococcus acidominimus: SAME_01422
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Entry
SAME_01422 CDS
T08039
Symbol
pcrA_2
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
saco
Streptococcus acidominimus
Pathway
saco03420
Nucleotide excision repair
saco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAME_01422 (pcrA_2)
03430 Mismatch repair
SAME_01422 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saco03400
]
SAME_01422 (pcrA_2)
Enzymes [BR:
saco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAME_01422 (pcrA_2)
DNA repair and recombination proteins [BR:
saco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAME_01422 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
SAME_01422 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
UvrD_C_2
SLFN-g3_helicase
DEAD
AAA_30
ResIII
AAA_11
PIF1
NPHP3_N
T2SSE
Motif
Other DBs
NCBI-ProteinID:
SNV41883
UniProt:
A0A239X6R5
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All DBs
Position
1:complement(1366703..1368628)
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AA seq
641 aa
AA seq
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MVTRTVEPEVEKVFEAIKQGQNFILEGGAGSGKTYSLISIIEKILIEEPKKSIVCITYTN
NAVAEIKSRIINDNLWVSTIHEFIWHIIGNFQKEIKECLVELINDDSQKLFVSPKDVIEE
ESISLDYFDDVRVDYAEWYSMSITEQNKVQISHDHILIVAEKMFSKYKKLCDVLADTANY
IFVDEYQDTSPLIVKILLEHLQKSTKKNVVGFFGDSMQAIYDSGVGDLNSYNLAKIQKTQ
NRRNPKKVIDLANKVRNDGLVQTPSNDDTAPNMDDGSVIAGTVKFVYGNDINQLDVLRNS
KLYKALEFDIAKKTKELRLTHKLNAEMAGFSKLFELYNTDLFVKLITGIKKKINENKIAD
KGKTFEELVEEAKIAVGKGGPLIIDVVNSIPELLAFYDEIKTCSFEEVSNKSKVNKESLL
AYKFNGLSSRYEAGTDRDRILKRLDLIYELLELYKTGKHNEFLRITKFNITSSEDKISLS
KVMTKISVDDITIGKVIELAEESGLISKDDLFTNFIESRGHYLWSRLKIMPFQEYVNSIA
YLREYVSVITQHKVKGSEYDNVLVLLDNGKWNQYNFDSLFGKGSVNENVQKRTKKLFYVA
ITRAMKNLIVYMPSNDSQIIQKAQDYFEPIDIIDVLSLVDE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggttacgagaacagtagagccagaagtagaaaaagtatttgaagcaataaaacaaggt
caaaattttattcttgaaggcggtgctggaagtggtaaaacttattcgctaatttcaatt
attgaaaaaatattgattgaagaacctaaaaaatcaattgtatgtattacctatactaat
aatgctgttgcagaaattaaatcacgaataattaatgataatttatgggtatcaacaatt
catgagtttatctggcatatcattggaaatttccaaaaagagattaaagaatgtcttgtt
gagttaataaatgatgattcacaaaagttatttgtttcaccaaaggatgtaattgaagaa
gaaagtatttcacttgattactttgatgatgtccgtgttgactatgctgaatggtactct
atgagtataacagagcaaaataaagtccaaataagtcatgaccatattctaatagttgcc
gaaaaaatgttttcaaaatataagaagttatgtgatgttttagcggatactgcaaactat
atttttgttgacgaatatcaagatacaagtccactaattgtgaaaatattattagagcat
cttcaaaagagtactaagaaaaatgttgtaggcttttttggagattctatgcaagctatt
tatgattcaggggtaggagacttaaattcttataatttggcaaagatacaaaaaactcaa
aatcgtcgtaatcctaaaaaagttattgatttagccaataaagttagaaatgatggttta
gttcaaactccatccaacgatgatacggctcccaatatggacgatgggagtgtcattgct
ggaacagtgaaatttgtctacgggaacgatattaatcaacttgatgttcttagaaatagt
aaactatataaagctttagaatttgatatagctaaaaaaacaaaagaattacgtctgaca
cataaacttaatgcagaaatggcaggtttctctaagttatttgaattatataatactgat
ttatttgtgaaattaattacaggtataaagaaaaaaatcaatgaaaataagatagctgat
aaaggaaaaacgtttgaagaactggtagaagaggctaaaatagctgtcggaaagggaggt
ccattaataattgatgtggttaattccatcccagaacttttggctttttacgatgaaatt
aagacgtgctcgtttgaagaagttagtaataagagtaaagttaataaagaatcgctgtta
gcttataaatttaatggattaagtagtagatatgaagcgggcacagatagggataggatt
cttaaaaggttagatttaatctatgagctattagagctgtataaaacaggtaagcataat
gaattcttacgtattactaaatttaatataacttcatcagaagataaaattagtctatct
aaagttatgacaaaaatctctgttgatgatattacaattggaaaagtcatagaacttgca
gaggaaagtggattaatttcaaaggatgacttatttactaattttattgaaagtagggga
cattatttatggtcacgacttaagataatgccatttcaagaatatgtaaatagtattgct
tatctcagagaatatgtatctgttataacgcagcataaggttaaaggtagtgaatatgat
aatgttttagttttattagataatggaaaatggaatcaatataattttgatagcctattt
ggtaaaggttcagttaatgagaatgtccaaaaaagaactaagaagttattctatgttgca
attactagagcaatgaaaaatttaattgtttacatgccgagtaatgatagtcagattatt
caaaaagcacaagattattttgaaccaattgatattattgatgttttgtctttagttgat
gagtaa
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