Streptococcus acidominimus: SAME_02292
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Entry
SAME_02292 CDS
T08039
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
saco
Streptococcus acidominimus
Pathway
saco03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
saco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAME_02292 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saco03021
]
SAME_02292 (rpoA)
03400 DNA repair and recombination proteins [BR:
saco03400
]
SAME_02292 (rpoA)
Enzymes [BR:
saco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAME_02292 (rpoA)
Transcription machinery [BR:
saco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAME_02292 (rpoA)
DNA repair and recombination proteins [BR:
saco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAME_02292 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Mg_chelatase_C
Motif
Other DBs
NCBI-ProteinID:
SNV47097
UniProt:
A0A239XKA6
LinkDB
All DBs
Position
1:complement(2175588..2176526)
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AA seq
312 aa
AA seq
DB search
MIEFEKPIITKIDENKDYGKFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL
HEFDTVPGVREDVMQIILNVKGLAVKSYVEDEKIIELDVQGPAEVTAGDILTDSDVEIVN
SDHYLFTIAEGASFKASMTVATNRGYVAAEGNKKDDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTEVAKTTDVMKEAEA
ANGEKVLDRTIEELDLSVRSYNCLKRAGINTVHDLTEKTEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKNDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaataataacaaaaattgatgaaaataaagattatggtaag
tttgttattgaaccacttgaacgtggttatggaacaaccttaggtaactctcttcgtcgt
gtacttctttcatctcttccgggggctgcggttacctcgattaagattgatggagtactt
cacgagtttgatactgtaccgggagtacgtgaagatgtcatgcagattattcttaacgtt
aaaggacttgctgtaaaatcttacgtcgaagacgaaaaaattattgaacttgatgtccaa
ggaccagcggaagtaactgctggagatatcttgactgatagcgatgttgagattgttaac
tcagatcattatctgtttacaatcgctgaaggtgcttcttttaaagccagcatgacagta
gctaccaatcgtggttatgttgctgcagaaggcaataagaaagacgatgcaccagtaggc
acattggctgtagactctatttatacgccagtgaaaaaagttaattatcaagttgagcct
gctcgtgtaggtagtaatgatggctttgataaattaactattgaaatcatgactaatggc
acaatcattcctgaagatgcgttaggtttgtctgctcgtgttttaattgaacatttgaat
ctctttacagatctaacagaagtagctaaaactacggatgttatgaaagaggcggaagca
gctaatggcgagaaggttctagaccgtaccattgaagaattagatttgtcagttcgttct
tacaactgtttgaaacgtgcaggcattaatactgttcacgatttaacagagaagactgaa
ccagaaatgatgaaagtccgtaaccttggtcgtaagagccttgaagaagttaaggttaaa
cttgctgatttaggtttaggactaaaaaacgataaataa
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integrated database retrieval system
