Sulfolobus acidocaldarius Ron12/I: SacRon12I_00920
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Entry
SacRon12I_00920 CDS
T02453
Name
(GenBank) XPD/Rad3 related DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sacr
Sulfolobus acidocaldarius Ron12/I
Pathway
sacr03022
Basal transcription factors
sacr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sacr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SacRon12I_00920
09124 Replication and repair
03420 Nucleotide excision repair
SacRon12I_00920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sacr03021
]
SacRon12I_00920
03036 Chromosome and associated proteins [BR:
sacr03036
]
SacRon12I_00920
03400 DNA repair and recombination proteins [BR:
sacr03400
]
SacRon12I_00920
Enzymes [BR:
sacr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SacRon12I_00920
Transcription machinery [BR:
sacr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SacRon12I_00920
Chromosome and associated proteins [BR:
sacr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SacRon12I_00920
DNA repair and recombination proteins [BR:
sacr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SacRon12I_00920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
PhoH
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AGE72440
UniProt:
M1J9G1
LinkDB
All DBs
Position
155041..156696
Genome browser
AA seq
551 aa
AA seq
DB search
MLKLRDWQEKLKDKVIEGLRNNFLVALNAPTGSGKTLFSLLVSLEVKPKVLFVVRTHNEF
YPIYRDLTKIREKRNITFSFLVGKPSSCLYAEKGAESEDIPCKYCELKGSIVEVKTDDSP
LSLVKKLKKDGLQDKFCPYYSLLNSLYKADVIALTYPYFFIDRYREFIDIDLREYMIVID
EAHNLDKVNELEERSLSEITIQMAIKQSKSEESRRILSKLLNQLREVVLPDEKYIKVENV
PKLSKEELEILADDYEDIRKDSLKQGKVNKIHIGSILRFFSLLSIGSFIPFSYSKRLVIK
NPEISYYLNLLNDNELSIILMSGTLPPREYMEKVWGIKRNMLYLDVEREIQKRVSGSYEC
YIGVDVTSKYDMRSDNMWKRYADYLLKIYFQAKANVLVVFPSYEIMDRVMSRISLPKYVE
SEDSSVEDLYSAISANNKVLIGSVGKGKLAEGIELRNNDRSLISDVVIVGIPYPPPDDYL
KILAQRVSLKMNRENEEFLFKIPALVTIKQAIGRAIRDVNDKCNVWLLDKRFESLYWKKN
LKCLNANKMKL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaactcagggattggcaagaaaaattaaaggacaaagttatagaaggacttaga
aataattttttggttgccttaaatgctcccactggtagtgggaagactctattttccctt
ttagtttctttagaggttaaaccgaaagtattgttcgtagtcagaacacataatgagttt
tacccaatctacagagacttaactaaaattcgagagaagagaaatatcactttttctttt
cttgtaggtaaaccctcatcatgtttatacgctgagaagggagcagagagcgaagatatt
ccatgcaaatattgtgagcttaaaggctctatagtcgaggtaaagaccgatgactctcca
ttgtccttagtgaagaagttgaagaaagacggacttcaggataaattctgcccctactac
tcattactcaattcattatataaggcagacgttatagccctaacttatccatatttcttt
atagatcgttatagggaatttattgatatagatttaagggaatatatgatagtcatagac
gaggctcataacttagataaggtaaacgagcttgaagaaaggagtctaagtgagattacg
attcaaatggcgataaaacaaagtaaaagtgaagagagcagaagaatattaagtaaactg
ttaaatcagcttagagaagttgtcttacctgatgagaaatacatcaaagtggagaatgtt
cctaagttatcaaaggaggaactggaaatcttagctgatgattatgaagatattagaaaa
gacagtttaaagcaaggcaaggtaaataaaatccatataggttctattctgaggtttttc
tctctactgtctataggctcatttattcccttttcatattctaagagactagttattaaa
aacccagaaatatcttattatctaaatctacttaatgataacgaattgtcaataatttta
atgtctggtacattaccgcctagggaatacatggagaaggtttggggtataaagagaaat
atgttataccttgatgtagaaagggaaatacaaaagagggtttctggttcttacgagtgt
tacattggtgtcgacgttacctctaagtatgatatgagaagtgacaatatgtggaagaga
tatgctgactatcttctaaaaatatactttcaggctaaggcaaatgttttggtagtattt
ccgtcatacgagataatggatagggttatgtctaggatttcattacctaagtatgttgaa
agtgaagactcttcagtagaggatctatactctgcaatatctgcaaataataaagtcctg
atagggagtgtaggaaaaggaaaattagccgaaggcatagaattaaggaacaatgataga
agtttgatttctgatgtggtaattgtgggtataccttacccaccacctgatgattacttg
aaaattttagcccaaagggtttcattgaagatgaatagggaaaatgaggagtttttgttt
aagattccagctttagttacaataaaacaggctataggaagggctattcgtgatgtaaat
gacaagtgtaatgtatggcttttggacaagcgtttcgagtccctttattggaagaaaaat
ctaaaatgtttgaatgcgaataaaatgaagctatga
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