Sulfolobus acidocaldarius Ron12/I: SacRon12I_02950
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Entry
SacRon12I_02950 CDS
T02453
Name
(GenBank) exosome complex RNA-binding protein Rrp42
KO
K12589
exosome complex component RRP42
Organism
sacr
Sulfolobus acidocaldarius Ron12/I
Pathway
sacr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sacr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SacRon12I_02950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sacr03019
]
SacRon12I_02950
Messenger RNA biogenesis [BR:
sacr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SacRon12I_02950
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
SacRon12I_02950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF1189
Motif
Other DBs
NCBI-ProteinID:
AGE72843
UniProt:
M1IAL2
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All DBs
Position
complement(487046..487876)
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AA seq
276 aa
AA seq
DB search
MSITPSNQNIVPTVKKDMILSALERGVRLDGRKPNEYRQLKVTLGYAKKAEGSALVKLGN
TLVLAGVKLEEDSPYPDTPNQGNLIVNVELLPLAYETFEPGPPDENSIELARIVDRSLRD
SKAIDLSKLVIAPGKKVWTLWVDVYVLDYDGNILDACMLASIAAIYDTKLPKVEVEGDEI
KINKEERLSIPLVNYPVVTVTTAKIGKYVVVDPNLDEESIADAKLSISYTKEGTIVGLQK
NYSGNLTFKEIDAMESTARATSQFLFEELKKQINLY
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattactccttcaaatcaaaatatagttccgaccgttaaaaaagacatgatacta
tctgcattggagaggggagttagattagacggaaggaagcctaatgagtatagacaatta
aaggtaactttgggttatgctaaaaaagctgaaggctcagcactagtaaaattaggtaac
acactagtattagcaggagttaaattagaggaagactctccttaccccgatacacccaat
caaggtaacttaattgttaacgttgagctattaccattagcctatgaaacatttgaacct
ggtccaccagatgagaattccatagagctagctagaatagttgatcgtagtttaagagat
tcaaaagctattgacctttcaaaattagttattgcgccagggaagaaagtatggacattg
tgggttgatgtatacgttcttgattatgacggaaatatactagacgcatgtatgctagct
tctatagctgcgatttatgacacaaaactccccaaagtagaagtagaaggcgacgaaata
aagataaataaggaagaaaggctaagtatacctttagttaattatcctgtagttactgtg
accacggcaaagataggcaagtacgttgtggttgatccaaatttggatgaagaaagtata
gcagatgctaagctttcaatttcatatacgaaagaaggcacaattgttggattgcagaaa
aattattctggcaatttgacatttaaagaaatagacgcaatggaaagtacagcaagagct
acatctcaatttttgttcgaagagcttaaaaagcagataaacttgtattaa
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