Sulfolobus acidocaldarius Ron12/I: SacRon12I_02955
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Entry
SacRon12I_02955 CDS
T02453
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
sacr
Sulfolobus acidocaldarius Ron12/I
Pathway
sacr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sacr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SacRon12I_02955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sacr03019
]
SacRon12I_02955
Messenger RNA biogenesis [BR:
sacr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SacRon12I_02955
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
SacRon12I_02955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AGE72844
UniProt:
M1J012
LinkDB
All DBs
Position
complement(487880..488611)
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AA seq
243 aa
AA seq
DB search
MIQLQKPKLILENGLRTDGRKLDELRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKE
MHPRHLALPDKASLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESTILLNLFPRT
VIDIFMEVLQADAGTRLVALMAASMALADAGIPMRDLIAGVAVGKADGSLVLDLNEQEDM
WGEADMPIAVLPSLGQVVLLQLNGFMTPDEFRRAFELAQKGISSIYALQKEALKNKYLEY
KEE
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgattcagctccaaaaaccgaagctaatacttgaaaacggccttaggactgacggaaga
aaacttgatgagctaaggcctataaagattgagttaggagtattaaagaatgctgacggt
tcagcaatatttgaaatgggtaatacaaaagtaattgctgcagtttacggacctaaagaa
atgcatccgagacatctagctctacctgataaagcatcactaagagtcagatatcatatg
actcctttttctactgacgaaaggaaaaacccagcgccaagtagacgagaaatcgaactc
tcaaaagttattagagaagcgttggaatccactatactattaaatttgtttcctagaacg
gttatagatatatttatggaagttcttcaagcggatgcgggaactagattagtcgcttta
atggcagcgtctatggctcttgcagatgcgggaattccgatgagagatttaattgcaggc
gttgctgtaggtaaagcagatggttcattagttttagatctgaatgagcaggaagatatg
tggggtgaggctgatatgcctattgctgttttgccatcattgggtcaggtagtattgtta
cagttaaatggatttatgacacctgatgaatttagaagagcctttgagcttgcacaaaaa
gggatctctagtatatatgcattacaaaaagaagcattgaaaaataagtatttagaatat
aaggaggaataa
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