Sulfolobus acidocaldarius Ron12/I: SacRon12I_06275
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Entry
SacRon12I_06275 CDS
T02453
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sacr
Sulfolobus acidocaldarius Ron12/I
Brite
KEGG Orthology (KO) [BR:
sacr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sacr03016
]
SacRon12I_06275
Enzymes [BR:
sacr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SacRon12I_06275
Transfer RNA biogenesis [BR:
sacr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SacRon12I_06275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
CpcD
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
AGE73491
UniProt:
M1J2L5
LinkDB
All DBs
Position
1093884..1094471
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AA seq
195 aa
AA seq
DB search
MLRLFTGINVPNYEKINELMQAISRTGADIKLVEPWNIHITLVFIGEVHENKLELIKDGL
KRISFNKFKVRLHGTGAFPSLGKPRVVWVGIDEGAIELRMIRGSIYKELVNRGIRPDEEK
EFSPHLTIGRVRGPRNMQNLIQVINEYQGTDFGEFTVEKFTLYKSTLTQKGPIYEPLLEV
ESNVSGGESFRTNKT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
ttgctaagacttttcacaggtattaatgtgccaaactatgaaaaaataaacgagttaatg
caggctataagtagaactggggctgatattaaactagtagaaccttggaatatccacatt
acacttgtatttattggagaggtacatgaaaataaattggaattaataaaagatggatta
aagagaatttcctttaacaaatttaaggtcaggctccacggtacaggagcttttccaagt
cttggaaaacccagagtagtttgggtaggaatagatgaaggggcaattgagttaagaatg
atacgtggctcgatctataaagagttagttaatagaggaattcgaccagatgaagagaaa
gaattttcgccccacttaacaataggaagagttagaggacctagaaatatgcaaaatcta
atccaagtcataaatgagtaccaaggcacagacttcggagaatttactgtggagaaattt
actttatataagagtacgttaacacaaaaaggtcccatatacgaacctttactggaagtg
gagtcaaatgtcagtggaggagaaagttttagaactaataagacctga
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