Sulfolobus acidocaldarius SUSAZ: SUSAZ_02765
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Entry
SUSAZ_02765 CDS
T02975
Name
(GenBank) exosome complex exonuclease
KO
K12589
exosome complex component RRP42
Organism
sacs
Sulfolobus acidocaldarius SUSAZ
Pathway
sacs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sacs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SUSAZ_02765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sacs03019
]
SUSAZ_02765
Messenger RNA biogenesis [BR:
sacs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SUSAZ_02765
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
SUSAZ_02765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AHC51015
LinkDB
All DBs
Position
complement(457598..458428)
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AA seq
276 aa
AA seq
DB search
MSITPSNQNIVPTVKKDMILSALERGVRLDGRKPNEYRQLKVTLGYAKKAEGSALVKLGN
TLVLAGVKLEEDSPYPDTPNQGNLIVNVELLPLAYETFEPGPPDENSIELARIVDRSLRD
SKAIDLSKLVIAPGKKVWTLWVDVYVLDYDGNILDACMLASIAAIYDTKLPKVEVEGDEI
KINKEERLSIPLVNYPVVTVTTAKIGKYVVVDPNLDEESIADAKLSISYTKEGTIVGLQK
NYSGNLTFKEIDAMESTARATSQFLFEELKKQINLY
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattactccttcaaatcaaaatatagttccgaccgttaaaaaagacatgatatta
tctgcattggagaggggagttagattagacggaaggaagcctaatgagtatagacaacta
aaagtaactttgggttatgctaaaaaagctgaaggctcagcactagtaaaattaggtaac
acactagtattagcaggagttaaattagaggaagactctccttaccccgatacacctaat
caaggtaacttaattgttaacgttgagctattaccattagcctatgaaacatttgaacct
ggtccacccgatgagaattccatagagctagctagaatagttgatcgtagtttaagagat
tctaaagctattgacctttcaaaattagttattgcgccagggaagaaagtatggacatta
tgggttgatgtatacgttcttgattatgacggaaacatattagacgcatgtatgctagct
tctatagctgcaatttatgacacaaaactccccaaagtagaagtagaaggtgacgaaata
aagataaataaagaagaaaggctaagtatacctttagttaattatcctgtagttactgtg
actacggcaaagataggcaaatacgttgtagttgatccaaatttagatgaagaaagtata
gcagatgctaagctttcaatttcatatacgaaagaaggcacaattgttggattgcagaaa
aattattctggcaatttgacatttaaagaaatagacgcaatggaaagtacagcaagagct
acatctcaatttttgttcgaagagcttaaaaagcagataaacttgtattaa
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