Sulfolobus acidocaldarius SUSAZ: SUSAZ_03105
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Entry
SUSAZ_03105 CDS
T02975
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
sacs
Sulfolobus acidocaldarius SUSAZ
Pathway
sacs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sacs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SUSAZ_03105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sacs03021
]
SUSAZ_03105
Enzymes [BR:
sacs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SUSAZ_03105
Transcription machinery [BR:
sacs03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
SUSAZ_03105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HMBD
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AHC51070
LinkDB
All DBs
Position
complement(506441..509083)
Genome browser
AA seq
880 aa
AA seq
DB search
MSEKIIRGVKFGVLSPNEIRQMSVTAIITSEVYDEDGTPIEGGVMDPKLGVIEPGQKCPV
CGNTLAGCPGHFGHIELIKPVIHIGYVKHIYDFLRTTCWRCGRIKIKEQDLERYKRIYNA
IKLRWPSAARRLVEYIKKISIKNLECPHCGEKQFKIKLEKPYNFNEERNGSIVKLSPSEI
RDRLERIPDSDVELLGYDPKSSRPEWMILTVLPVPPITIRPSITIESGIRAEDDLTHKLV
DIIRLNERLKESIEAGAPQLIIEDLWDLLQYHVATYFDNEIPGLPPAKHRSGRPLRTLAQ
RLKGKEGRFRGNLSGKRVDFSARTVISPDPNLSIDEVGIPYTIARMLTVPERVTNINIER
IRQYIINGPDKWPGANYVIKPDGRRIDLRYVKDRKELASSITAGYVVERHLVDGDVVLFN
RQPSLHRISMMAHKVRVLPGRTFRLNLLDCPPYNADFDGDEMNLHVPQSEEAIAEARELM
LVHKNIITPRYGGPIIGGGQDYISGAYLLSVKTTLLTVEEVATILGVTDFVGELGEPAIL
APKPYYTGKQVISLFLPKDFNFHGPANISKGPRACKDEICPHDSFIVIKNGLLLEGVFDK
KAIGNQQPESMLHWSIREYGTEYGKWLMDNVFKMFIRFLEMRGFTMTLDDITIPEEAQNE
ITTKIKEGYSQVDEYIRKFNEGQLEPIPGRTIEESLESYILDTLDKLRKVAGEIATKYLD
PFNNVYIMAITGARGSELNITQMTALLGQQSVRGERIRRGYRERTLSLFKYGDIAPEARG
FVKNSFMRGLSPYEMFFHAAGGREGLVDTAVKTSQSGYMQRRLINALSDLRIEYDGTVRS
LYGDIVQVVYGDDAVHPMYSAHSKSVNVNRVIERVIGWKR
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaagatcatacgaggcgtaaaatttggtgtgttatcacctaatgaaataagg
caaatgtcagttacggcaataataacttcagaggtatatgatgaagacggtactccaatc
gaaggaggagtaatggatccgaaactaggtgtaatagagcccggtcaaaaatgtcccgta
tgtggtaacacgttagcaggttgtcctggtcatttcggtcatatagaacttattaaacca
gtcattcacataggttatgttaaacacatttatgatttccttaggaccacttgttggaga
tgtggtagaataaagataaaagagcaagatttagagagatataagagaatatataatgct
ataaagctcagatggccatctgctgcaagaaggttagtagagtatataaagaaaatatct
attaagaacctagaatgtcctcattgtggagagaaacaatttaagataaaactagaaaaa
ccatacaattttaatgaagaaagaaatggctcaatagtgaaattatctccatcagagata
agggatagattagagagaatacctgatagtgatgtcgagcttttgggatatgatcccaaa
tcctctagacctgagtggatgattttaactgttttaccagttcctccgataaccattagg
ccatctataactattgaaagcggaataagagctgaagacgatcttactcataagcttgtt
gatataataagacttaatgagagattaaaagaaagcattgaggcaggcgccccacaatta
ataatagaggatttatgggacttattgcagtatcatgtagctacctattttgataacgaa
ataccaggtttacctccagctaagcatagatctggaagacctttaaggacacttgctcaa
agattgaaaggtaaagagggtagatttagggggaacttatcaggcaagagggttgatttc
tccgcaagaaccgtaatatctccagaccccaatttaagcatagatgaagtaggaattcca
tatactatagctagaatgttaaccgtacctgaaagagtaaccaatataaacatagaaaga
ataaggcaatacattataaacggccccgataaatggcctggagcgaattatgtaataaaa
cctgatggtagaagaattgatttgagatatgttaaagatagaaaagaattagcttctagt
ataaccgcaggatatgttgttgagagacacttagttgatggagacgtggtactctttaac
agacagccttcgttgcacaggatctcaatgatggctcataaagttagagtgttaccaggt
agaacatttagattaaatctgttagattgtcctccatataacgctgactttgatggagat
gaaatgaatctacatgtgccacaatctgaggaagctatagcagaggcaagggaattaatg
ttagtgcataaaaacataattactcctagatatggcggacccatcataggaggaggacag
gattatataagtggtgcgtatttgttatcagtaaaaactaccctattaacagttgaggaa
gttgctactatattgggagtaacagactttgtaggagagctgggagaaccagctatactt
gctccaaagccatattacactggaaagcaggtaatcagtctatttttgcctaaagatttt
aacttccatggtcctgctaatatatcaaaaggacctagagcatgtaaggatgagatctgt
cctcatgactcatttatcgttattaaaaatggactattgttagaaggtgtatttgataag
aaagcaataggaaatcaacagccagaaagtatgttgcattggtccattagagaatatggt
actgaatatggtaaatggttaatggataatgtgtttaagatgttcattaggtttttagag
atgagaggtttcactatgactctagacgatataactataccagaggaagctcaaaatgaa
ataaccactaaaattaaggagggatatagtcaggttgatgaatatataaggaaatttaat
gaaggtcagcttgaacctatacccggaagaacaattgaagaaagcctagaaagttatata
ttagatacactagataagctgagaaaagtagcaggagagatagctacgaaatacttagat
ccgtttaacaatgtgtacattatggctataaccggtgctagaggaagcgagttgaatata
acccagatgaccgctttattaggacagcaatcagtgagaggagagagaattagaagagga
tatagagaaagaacactatctttatttaaatatggtgatatagcacctgaagcaagaggt
ttcgttaagaactccttcatgagaggtctaagcccatacgaaatgttcttccacgcagca
ggaggtagagagggattagttgatactgctgtaaaaacatcacaaagcggttacatgcag
aggaggttaattaatgctttatcagatctaaggatagaatatgatggaactgtgagaagc
ttatatggagatattgttcaagtagtatatggagatgatgccgtgcatcccatgtatagc
gctcacagtaaaagtgtaaatgttaacagagttatagaaagagttattggttggaagagg
tga
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