Sulfolobus acidocaldarius SUSAZ: SUSAZ_06145
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Entry
SUSAZ_06145 CDS
T02975
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sacs
Sulfolobus acidocaldarius SUSAZ
Brite
KEGG Orthology (KO) [BR:
sacs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sacs03016
]
SUSAZ_06145
Enzymes [BR:
sacs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SUSAZ_06145
Transfer RNA biogenesis [BR:
sacs03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SUSAZ_06145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
CpcD
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
AHC51565
LinkDB
All DBs
Position
1060919..1061506
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AA seq
195 aa
AA seq
DB search
MLRLFTGVNVPNYEKINELMQAINRTGADIKLVEPWNIHITLVFIGEVHENKLELIKDGL
KRISFNKFKVRLHGTGAFPSLGKPRVVWVGIDEGAIELRMIRGSIYKELVNRGIRPDEEK
EFSPHLTIGRVRGPRNMQNLIQVINEYQGTDFGEFTVEKFTLYKSTLTQKGPIYEPLLEV
ESNVGGGESFRTNKT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
ttgctaagacttttcacaggtgttaatgtgccaaactatgaaaaaataaatgagttaatg
caggctataaatagaactggggctgatattaaattagtagaaccttggaatatccatatt
acacttgtatttattggagaggtacatgaaaataaattggaattaataaaagacggatta
aagagaatttccttcaacaaatttaaggtcaggcttcatggtacaggagcttttccgagt
cttggaaaacctagagtagtttgggtaggaatagatgaaggtgcaattgagttaagaatg
atacgtggctcgatttataaagagttagttaatagaggaattagaccagatgaagagaaa
gaattttcgccccacttaacaataggaagagttagaggacctagaaatatgcaaaatcta
atccaagtcataaatgagtaccaaggcacagacttcggagaatttacagtggagaaattt
actttatataagagtacattaacacaaaaaggtcccatatacgaaccgttactggaagtg
gagtcaaatgtcggtggaggagaaagttttagaactaataagacctga
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