Streptomyces actuosus: DMT42_26565
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Entry
DMT42_26565 CDS
T08084
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sact
Streptomyces actuosus
Pathway
sact03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sact00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DMT42_26565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sact03021
]
DMT42_26565
03019 Messenger RNA biogenesis [BR:
sact03019
]
DMT42_26565
Transcription machinery [BR:
sact03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DMT42_26565
Messenger RNA biogenesis [BR:
sact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DMT42_26565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWT45494
UniProt:
A0A2U9P8F6
LinkDB
All DBs
Position
5701581..5703608
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AA seq
675 aa
AA seq
DB search
MSDTTDLMGARVEETAAAPATDASAPATGAGSRRRRGTGLEGMVLAELQQVASGLGIRGT
ARMRKSQLIEVIKEAQAGGGAAPAKAEAATDSKPKRRATSRTRTGDETPAEKKADKGDKA
EAPAEKATAQQQIEIPGQPAASDDAPGERRRRRATADAGSPSAAPETVAAEAKNEPKAET
PAQQSQQQDGKSESGEGGEGRRRDRRERGRDRDRDRDRGDRERGDRDRRGKGDDQQQGQQ
RGQQQGQQQGGGRQDRQQQDDDDFEGGRRRGRGRYRDRRGRRGRDEIASEPQINEDDVLI
PVAGILDILDNYAFIRTSGYLPGPNDVYVSLAQVRKNGLRKGDHITGAVRQPKEGERREK
FNALVRLDSVNGMAPEHGRGRPEFNKLTPLYPQDRLRLETDPGVLTTRIIDLVSPIGKGQ
RGLIVAPPKTGKTMIMQAIANAITHNNPECHLMVVLVDERPEEVTDMQRSVKGEVISSTF
DRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRILSGGVDST
ALYPPKRFFGAARNIEDGGSLTILATALVDTGSRMDEVIFEEFKGTGNMELKLDRKLADK
RIFPAVDVDASGTRKEEILLGAEELGIVWKLRRVLHALDQQQAIELLLDKMKQTKSNVEF
LMQIQKTTPAPGNGD
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgcacgtgtcgaggagaccgctgccgcgcccgcc
acggacgcctccgcgcctgccaccggtgccggctcccggcggcgccgcggtaccggcctc
gagggcatggtgctggccgagctgcagcaggtcgcctccggcctcggcatcaggggcacg
gcgcggatgcgcaagagccagctgatcgaggtcatcaaggaagcgcaggccggagggggt
gccgccccggcaaaggccgaggccgccaccgacagcaagccgaagcgccgcgccacctct
cggacgcgcacgggtgacgagacccccgccgagaagaaggccgacaagggcgacaaggcc
gaggcccccgccgagaaggcgacggcccagcagcagatcgagatccccggccagcccgcc
gcctccgacgacgctccgggcgagcgccgtcgccgtcgcgccaccgccgacgccggcagc
ccctccgcggcccccgagacggtcgccgccgaggcgaagaacgagccgaaggccgagacc
ccggcccagcagtcgcagcagcaggacggcaagtccgagtccggtgagggcggcgagggc
cgccgccgcgaccgccgcgagcgcggccgggaccgtgaccgcgaccgcgaccgcggggac
cgtgagcgtggggaccgcgaccgccgcggaaagggcgacgaccagcagcagggccagcag
cgcggtcagcagcagggtcagcagcagggcggcggccgccaggaccgccagcagcaggac
gacgacgacttcgagggcggccgccgccgcggccgtggccgctaccgcgaccgccggggc
cgccgcggccgcgacgagatcgcctccgagccgcagatcaacgaggacgacgtcctgatc
cccgtcgcgggcatcctcgacatcctcgacaactacgccttcatccggacctccggctac
ctgcccggcccgaacgacgtgtacgtctccctcgcccaggtccgcaagaacggcctgcgc
aagggcgaccacatcaccggtgccgtccgccagcccaaggaaggcgagcgccgcgagaag
ttcaacgcgctggtccgcctggactccgtcaacggcatggcgcccgaacacggccgcggc
cgcccggagttcaacaagctgacgccgctgtacccgcaggaccgcctccgcctggagacg
gacccgggcgtgctcaccacccgcatcatcgacctcgtctcgcccatcggtaagggccag
cgcggtctgatcgtggccccgccgaagaccggcaagaccatgatcatgcaggcgatcgcc
aacgcgatcacgcacaacaaccccgagtgccacctgatggtcgtcctcgtcgacgagcgt
ccggaagaggtcaccgacatgcagcggtcggtcaagggcgaggtcatctcctcgaccttc
gaccgcccggccgaggaccacaccaccgtcgccgagctggccatcgagcgcgccaagcgc
ctggtggagctgggccacgacgtggtcgtgctgctggactccatcacgcgtctgggccgt
gcgtacaacctcgccgcgcccgcctccggccgcatcctctccggtggtgtcgactcgacc
gccctgtacccgccgaagcgcttcttcggtgcggcccgcaacatcgaggacggcggctcg
ctgaccatcctcgccaccgccctggtggacaccgggtcccgcatggacgaggtgatcttc
gaggagttcaagggcaccggcaacatggagctcaagctcgaccggaagctcgccgacaag
cgcatcttcccggcggtggacgtcgacgcgtccggcacccgcaaggaggagatcctgctc
ggtgccgaggagctgggcatcgtgtggaagctgcgccgcgtcctgcacgcgctggaccag
cagcaggcgatcgagctgcttctcgacaagatgaagcagacgaagtcgaacgtcgagttc
ctgatgcagatccagaagacgacgccggctccgggcaacggagactga
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