Streptomyces actuosus: DMT42_27870
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Entry
DMT42_27870 CDS
T08084
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sact
Streptomyces actuosus
Pathway
sact03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DMT42_27870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sact03400
]
DMT42_27870
Enzymes [BR:
sact01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DMT42_27870
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DMT42_27870
DNA repair and recombination proteins [BR:
sact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DMT42_27870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
Auto_anti-p27
DZR
Zn_ribbon_recom
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AWT45730
UniProt:
A0A2U9P7L7
LinkDB
All DBs
Position
5989656..5990516
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AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLERWVAHRTVADAEVLHPRAVRRHVAGADDFVQRLTGHRVGTPSRRG
KYLWLPLEDSGQAVLAHLGMSGQLLVQPHGAPDEKHLRIRVRFADDLATELRFVDQRTFG
GLSLHDTTVDGLPDVIAHIARDPLDPLFDEDAFHRALRRKKTTIKRALLDQSLISGVGNI
YADEALWRARIHYDRPTAGFTRPRTLELLGHVRDVMNAALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREGLPCRRCGTPMRRRPWMNRSSYFCPRCQRPPRVVS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgcccgaggtcgaggtcgtacggcggggtcttgagcggtgggtcgcccac
cggaccgtcgccgacgccgaggtgctgcacccgcgtgccgtgcgccgtcacgtggccggc
gcggacgacttcgtgcagcggctgacggggcaccgcgtcggcacgcccagccggcgcggc
aagtacctgtggctgccgctggaggacagcgggcaggcggtcctcgcgcacctcggcatg
agcggtcagctactggtgcagccgcacggggcgccggacgagaagcacctgcggatccgc
gtccgcttcgccgacgacctcgccaccgaactccgcttcgtggaccagcgcaccttcggc
ggcctgtcgctgcacgacacgaccgtcgacgggctgcccgacgtcatcgcgcacatcgcc
cgcgaccccctcgacccgctcttcgacgaggacgccttccaccgggcgctgcgccgcaag
aagaccaccatcaagcgggcgctgctggaccagtcgctgatcagcggggtgggcaacatc
tacgcggacgaggcgctgtggcgcgcccgcatccactacgaccgccccaccgcgggcttc
acccgcccgcgcacgctggaactcctcgggcacgtccgggacgtgatgaacgcggccctg
gccgtcggcggcaccagcttcgacagcctgtacgtcaacgtcaacggcgagtcgggctac
ttcgaccgctcgctcgacgcgtacgggcgtgaggggctgccgtgccggcgctgcggcacg
ccgatgcgccgccgcccgtggatgaaccgctccagctacttctgcccgcgctgtcagcgg
ccgccgcgcgtggtgtcgtag
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