Streptomyces actuosus: DMT42_33595
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Entry
DMT42_33595 CDS
T08084
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sact
Streptomyces actuosus
Pathway
sact03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DMT42_33595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sact03400
]
DMT42_33595
Enzymes [BR:
sact01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DMT42_33595
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DMT42_33595
DNA repair and recombination proteins [BR:
sact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DMT42_33595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
Zn_ribbon_RRN7
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AWT46736
UniProt:
A0A2U9PAL4
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All DBs
Position
7349308..7350171
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AA seq
287 aa
AA seq
DB search
MPELPEVEALKDFLTEHLVGHEIVRVLPVAISVLKTYDPPLTALEGAGVTAVHRYGKFLD
VATDAGPHLVTHLARAGWLHWKDRLPDGPPRPGKGPLALRVALETGAGFDLTEAGTQKRL
AVYVVDDPQRIEGVARLGPDPLAADFDEERLAALLAGERRQIKGALRDQSLIAGIGNAYS
DEILHAARMSPFRLAASLTPQDVHRLYEALNTTLSEAVERSRGVAAGRLKAEKKSGLRVH
GRTGEPCPVCGDTVREVSFSDSSLQYCPTCQTGGKPLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactccccgaggtcgaagcgctgaaggacttcctcaccgagcacctggtcggc
cacgagatcgtccgggtgctgccggtcgcgatcagcgtcctgaagacgtacgacccgccc
ctgaccgccctggagggcgccggggtcaccgccgtgcaccggtacggcaagttcctcgac
gtcgcgacggacgccggcccgcacctggtcacccacctcgcccgcgcgggctggctgcac
tggaaggaccgcctgcccgacggcccgccccgccccggcaagggccccctcgcgctgcgg
gtcgccctggagaccggcgccggtttcgacctgaccgaggccggcacgcagaaacgcctc
gcggtgtacgtcgtcgacgacccgcagcgcatcgagggcgtcgcccggctgggccccgac
ccgctcgccgccgacttcgacgaggagcggctggccgcactgctggcgggggagcggcgc
cagatcaagggcgccctgcgcgaccagagcctcatcgccgggatcggcaacgcctacagc
gacgagatcctgcacgcggcgaggatgtcgccgttcagactggccgcgtccctgaccccg
caggacgtccaccgcctctacgaggccctgaacaccacgctgtccgaggccgtggaacgc
tcccggggcgtcgcggcgggccggctgaaggcggagaagaagtccgggctgcgggtccac
ggccgcaccggcgagccctgccccgtctgcggcgacaccgtccgcgaggtctccttcagc
gactcctccctgcagtactgcccgacctgccagacgggcggcaagcccctggcggaccgc
aggctgtcgcggctgctgaagtga
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