Sporomusa acidovorans: SPACI_004840
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Entry
SPACI_004840 CDS
T10566
Symbol
rpoA_1
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sacv Sporomusa acidovorans
Pathway
sacv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sacv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SPACI_004840 (rpoA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sacv03021
]
SPACI_004840 (rpoA_1)
03400 DNA repair and recombination proteins [BR:
sacv03400
]
SPACI_004840 (rpoA_1)
Enzymes [BR:
sacv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SPACI_004840 (rpoA_1)
Transcription machinery [BR:
sacv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SPACI_004840 (rpoA_1)
DNA repair and recombination proteins [BR:
sacv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SPACI_004840 (rpoA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
XFO70485
LinkDB
All DBs
Position
518657..519616
Genome browser
AA seq
319 aa
AA seq
DB search
MIEIEKPKIEIVEISEDNRYGKFVWEPLDRGFGITLGNSLRRVLLSSLPGAAVTSVKIDG
VLHEFATVPGVREDVTDIILNLKELCLKMHSDEPKVLLVEATEEGEVTAGDIKADADIDI
LNPELHLATVGAGSQLRMEIMVEKGKGYVPADKNKKPDHVIGIIPVDSIFSPIVRVNYNV
TDTRVGNVTNYDKLTLEVWTDGSMRPEEAVSKAAGIMVSHLKVFQNIAGEPPEEDEDQGL
VSEEPAEGKNKVMEMTIEDLDLSVRSYNCLKRAGINTVAELVQKSEEDMMKVRNLGRKSL
EEVKKKIIEMGLGLAEHEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaatcgaaaaaccgaagatcgaaatagtagaaataagcgaagacaaccgctat
ggaaaatttgtatgggaaccattagaccggggctttggcattacgttgggcaatagttta
cggcgggtgctcctatcctctttgcctggcgcagccgtaacctcagtaaaaattgatggt
gtgcttcatgaatttgctactgttcccggtgttcgggaggacgtcaccgacattattcta
aacttaaaagaattatgtctgaaaatgcatagtgacgagcctaaagttttacttgttgaa
gcgactgaagaaggcgaagtcactgcaggcgatatcaaggccgacgccgatattgatatt
ttgaaccctgaactccacttagcgacagtaggtgcgggcagtcagctccgcatggaaatc
atggttgaaaaaggcaaaggctatgtaccggctgacaaaaataaaaaacccgaccatgta
atcgggattattcctgttgattccatcttctcaccgattgttcgcgtcaattacaatgtt
accgatacgcgtgttggtaacgtaaccaactatgacaaactaacattagaagtatggaca
gacggcagtatgcgtcccgaagaggcagtcagcaaagctgctggcattatggtgtcgcac
ctgaaagtgtttcaaaatattgccggagaacctcctgaagaggatgaggatcagggtttg
gtttcagaagaaccagctgagggtaaaaacaaagtaatggaaatgaccattgaggatttg
gatctctcagtgcgttcttacaactgcttaaaacgggccggaattaacacagtggcagaa
ctcgtgcaaaagagcgaagaagatatgatgaaagttcgtaacttaggcagaaagtcactg
gaagaagttaagaaaaaaattattgaaatgggtctgggacttgcagaacatgaagagtaa
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