Sporomusa acidovorans: SPACI_025380
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Entry
SPACI_025380 CDS
T10566
Symbol
lcfB_3
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sacv Sporomusa acidovorans
Pathway
sacv00061
Fatty acid biosynthesis
sacv00071
Fatty acid degradation
sacv01100
Metabolic pathways
sacv01212
Fatty acid metabolism
sacv02024
Quorum sensing
sacv04146
Peroxisome
Module
sacv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sacv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SPACI_025380 (lcfB_3)
00071 Fatty acid degradation
SPACI_025380 (lcfB_3)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SPACI_025380 (lcfB_3)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPACI_025380 (lcfB_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sacv01004
]
SPACI_025380 (lcfB_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sacv04147
]
SPACI_025380 (lcfB_3)
Enzymes [BR:
sacv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SPACI_025380 (lcfB_3)
Lipid biosynthesis proteins [BR:
sacv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SPACI_025380 (lcfB_3)
Exosome [BR:
sacv04147
]
Exosomal proteins
Exosomal proteins of breast milk
SPACI_025380 (lcfB_3)
Exosomal proteins of breast cancer cells
SPACI_025380 (lcfB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
XFO72486
LinkDB
All DBs
Position
2674201..2675835
Genome browser
AA seq
544 aa
AA seq
DB search
MLITEILSQNARLYGDDISLVEINPELQERQIVPWSEYELIEPNPAAGFRQEITWREFEE
KANKFANLLMNSGIRKGDKVAILLMNCLEWLPIYFGILKTGALAVPLNFRYTTEEIKYCL
ELAEVTALVFGPEFIERVEPINDKISGIKLHFFVGESCPSFAQNYKQLVSVCSDEAPQIP
ITEEDDAAIYFSSGTTGFPKAILHSQRSLVSACYTEQNHHRQTRGDNFLCIPPLYHTGAK
MHWFGSLLVGGKAVLLRGVKPKWILKAVSEEKITIVWLLVPWVQDILDAISSGEVDLNDY
NLQQWRLMHIGAQPVPPSLIQRWKKYFPNHLYDTNYGLSESIGPGCVHLGMDNIHKVGAI
GKQGYNWEAMIIDGDGHLVPQGHVGELIVKGPGVMKCYYRDPEATAAVLKDGWLLTGDMA
RMDKDGFIYLVDRKKDVIISGGENLYPVQIEDFLHRYDAIKDVAVIGLPDQRLGEIAAAI
IELKPDCLCSEREIREFCSSLPRYKRPRRIIFDVVPRNPTGKIEKPKLRKKFCASNLVAV
QTQN
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
gtgctaataacggaaatactttctcaaaatgcgaggctatatggtgatgatattagcctg
gttgaaattaatccggaactacaggagcggcaaatcgttccctggagtgaatatgaactt
attgaaccaaatccggcggcaggttttcggcaagaaataacttggcgtgagtttgaggaa
aaggcaaataaatttgctaatcttcttatgaacagcggtatcagaaaaggtgataaagtt
gcgatattattgatgaattgtcttgaatggctgccaatttacttcggtattcttaaaacc
ggtgctctggcagtgcctctgaattttcgttatactacggaagaaataaaatactgctta
gaattagcggaagttacagccttggtattcggaccggaatttattgaacgggtggaaccc
attaacgataaaatttcaggaattaaattgcatttttttgtaggggaaagttgtccgtca
tttgctcaaaattataagcagcttgtgtccgtgtgttctgatgaagccccgcaaattcct
ataacagaagaagacgatgcggctatctatttttcttctgggactacaggttttcccaaa
gccattcttcattcccagcggagtctcgtatccgcttgctatacagagcaaaaccatcac
agacagacccggggggataatttcttatgtattccgccattgtatcataccggtgccaag
atgcattggtttggtagtttgctggtaggcggtaaagcggttttgctgcggggggtcaag
cccaagtggatactaaaagctgtttctgaagaaaagataacaatagtctggctccttgtt
ccctgggtacaggatatccttgacgccattagcagcggcgaggtggatctaaatgattat
aatctacagcagtggcggttaatgcatattggtgcgcagccggttccacccagtttaatt
cagcgctggaaaaaatattttcccaaccatttgtacgataccaattatggcttgagtgaa
tcaataggtccaggttgtgttcatcttggaatggataacattcacaaagttggggcaatt
ggtaagcagggatacaactgggaagccatgattattgacggcgatggtcatcttgtgcca
cagggacatgttggtgaactgattgtaaaagggccgggggttatgaaatgttactaccgt
gacccggaagcgactgctgccgtattgaaagatgggtggcttttaaccggtgatatggcg
cgaatggacaaagacggcttcatttatttagttgatcgtaaaaaggatgttatcattagt
ggcggtgagaacctgtatcctgtacagattgaggattttctccacagatatgatgcaatt
aaggacgtagcggtaattggtctgccggatcagcgccttggcgaaattgcggcggcgatt
atagagttaaagcctgattgtctatgttcagagagagagataagggaattctgttcgtcg
ttgccgcgatataaacgtccgcgtaggattatttttgacgtagttccgcgcaaccccaca
ggcaagattgaaaagccgaaacttcggaaaaaattttgcgcaagcaatttggtagcggtt
caaacgcaaaattga
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