KEGG   Sporomusa acidovorans: SPACI_027000
Entry
SPACI_027000      CDS       T10566                                 
Symbol
rny
Name
(GenBank) Ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
sacv  Sporomusa acidovorans
Pathway
sacv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sacv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPACI_027000 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sacv03019]
    SPACI_027000 (rny)
Messenger RNA biogenesis [BR:sacv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SPACI_027000 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B TMP_3 Ribosomal_S18 KH_2 DUF7669 fvmYukDl_N Cas3_HD KH_NusA_C
Other DBs
NCBI-ProteinID: XFO72647
LinkDB
Position
2828828..2830096
AA seq 422 aa
MQKEENLDRKIDSLEKKEEILSRKEAEVDKSQEKIHELYAKQLTELERLSGLTSEEARSL
LLANVEEEIKHETAMLIKDLEQQAKEEADKKAKEIISLAIQRCAADHVAETTVSVVSLPN
DEMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILSGFDPVRREVARIALEKLIVDGR
IHPARIEEMVEKAQKEVEQKIKEAGEQATFETGVHGLHPELIKLLGRLKFRTSYGQNVLK
HSIEVSHLAGVMASELGVDVMLAKRAGLLHDIGKAVDHEVEGPHVTIGADLAKKYREAAE
VVNAIAAHHGDEEPKTIQAVLVAAADAVSAARPGARRETLESYLKRLTRLEEIAESFEGV
EKSFAIQAGREIRIMVKPDKIDDLTAVRLVRDIVKKIESELEYPGQIKVTVIRETRAVDY
AK
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgcaaaaagaagaaaatcttgaccggaaaattgattctcttgaaaagaaagaagagatt
cttagccgtaaagaggctgaggtggataagagtcaagaaaaaatccatgagctttatgct
aagcaactgactgaacttgaaaggctttccggtttaacgtcagaagaagcccgcagtttg
ctgcttgccaatgttgaagaagagattaaacatgagacggcaatgctcattaaagattta
gaacagcaggccaaagaagaagcagacaagaaggctaaggaaattatatcgttagctatc
caaagatgtgcagctgatcatgttgcagaaactacggtatcggtagtttccctaccaaat
gatgaaatgaagggtaggattatcggtagagagggacgtaatattcgaacacttgagaca
cttaccggtatcgatttgattattgatgatactcctgaggccgttattctgtcagggttt
gaccctgttagacgggaagttgccagaattgcgctagaaaagcttattgttgacggccgc
attcatcctgcgcgtattgaggaaatggtggagaaagctcaaaaagaagttgaacagaaa
attaaggaggcaggcgaacaggcaacctttgaaactggggttcatggtctgcatcctgag
ttgataaaacttctcggacgattaaaattccgtaccagctatggtcagaatgtactcaag
cattcaattgaggtgtcacacttagctggagtcatggcatcagaacttggtgtcgacgtg
atgttagccaaacgagctggattgcttcatgatataggcaaggctgttgatcatgaagtc
gaaggtcctcatgtgaccatcggtgctgatttagcgaaaaaataccgtgaagcagccgaa
gttgtaaatgcaattgctgctcatcacggcgatgaagaacctaaaactatccaggcggta
cttgtagcagcggctgacgctgtatctgccgcaagaccaggcgctcgcagagaaacttta
gagagttatcttaagcggttaacacgattggaagaaattgctgagtcatttgagggtgtg
gaaaaatcatttgctattcaagcaggccgtgaaattcggattatggttaaaccggataaa
attgatgatttaacggctgttcgtttagtaagggatattgtcaagaagatcgaaagtgaa
cttgagtatccaggtcaaataaaagttaccgttatccgcgaaacacgtgcggttgattat
gcaaaataa

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