Sporomusa acidovorans: SPACI_029700
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Entry
SPACI_029700 CDS
T10566
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sacv Sporomusa acidovorans
Pathway
sacv03410
Base excision repair
sacv03430
Mismatch repair
sacv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sacv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPACI_029700 (recJ)
03430 Mismatch repair
SPACI_029700 (recJ)
03440 Homologous recombination
SPACI_029700 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacv03400
]
SPACI_029700 (recJ)
DNA repair and recombination proteins [BR:
sacv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SPACI_029700 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SPACI_029700 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SPACI_029700 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
CDT1_C
Motif
Other DBs
NCBI-ProteinID:
XFO72916
LinkDB
All DBs
Position
complement(3072882..3074936)
Genome browser
AA seq
684 aa
AA seq
DB search
MARLKKTWRLFPAKRELANELSRKLNISRYIAQVLINRGITSEQAAYEFLYADTKNMIDP
YLLKGMKKAVARIAQAVERQEKITIYGDYDVDGITACAVLYKTMKRFGANIEFYIPDRQS
EGYGLNSTALNSLIHAGTKLVITVDCGISAVKEIAAVLGQLDVIITDHHQPPAELPGALA
IINPKQPGCLCPDKNLAGVGVAFKLCQGLWQHYHGAEGQFFDYLDIVAIGTVADIVPLTG
ENRALVKAGLKRLPMTENLGLKALLAICGLANKAIDSGNIGFVIAPRLNAVGRVSQATAG
VELLITNDYQRAQELAQLLNEENLARQNIEKMILAKAEKQLEAIDLHTTKVLVLAGEEWH
SGVIGIVASRLVDKYYKPVIMISLCDGIGKGSCRSIPAFDIYMALNHCSDLLTQFGGHRQ
AAGLVVPAENIQALRQRLNDLAASTLSATDYVPVLTIDSVICLEEIGAPFVEQMACLEPY
GFGNPSPVFACRDVALGEKRCIGQQSRHLKLKLKNNGVKDVIAWNMGELSNNLTCDENID
LAFVPKFNEWQGQKNLQLVAQDIRQSLTSQTQAALNQIAPDRDCIVQVYLLLKQSNQSGQ
YNFFLKNIMDKISDNYHTVISVKVLETVLTILRELHLITTKENQERDEITIQLTPAPTKK
LDLMDSPTFRNCLKMRAEYLAENI
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcaagactgaaaaaaacatggagattgtttccggctaaacgcgaactggcaaatgag
cttagccggaaacttaatatctcaagatatattgcacaggtattaatcaatcgcggtatt
actagcgaacaggcagcgtatgaatttctctatgccgatacgaaaaatatgattgatccc
tatttattaaaagggatgaaaaaggctgttgcacgaattgcccaggctgttgagagacag
gagaaaattacaatttacggggattatgatgtagatggcattaccgcctgtgccgttctt
tataaaacaatgaagaggtttggcgcaaatattgaattttatatacctgacaggcagagt
gaaggatacgggctaaattcaactgcgttaaatagccttatacatgcgggaacaaaactt
gttattaccgttgactgtggtattagtgctgtaaaggaaattgcggcagtgctcgggcag
cttgatgtcattataaccgaccatcatcagccccctgccgaactgcctggggctctggca
atcattaatcctaaacagccaggatgtttatgtccggataaaaatttggcgggagttggc
gttgcttttaaattatgccaaggcttatggcagcattaccatggagctgaaggccaattt
tttgactatctggatattgtggctattggcacagtggctgatattgtgccactcaccgga
gaaaatcgggctttggtgaaagccggtctgaaacggttgcccatgacggagaatttaggc
ttaaaagccttgttggcaatatgcggtttagctaataaggccattgatagtggcaatatt
ggttttgttattgcgccgcgtcttaacgctgtaggacgtgtcagtcaagccaccgcaggg
gtagaattgttaataaccaatgactatcagcgtgcccaggaactggcacagttgttgaat
gaggagaatttagcccggcaaaatattgaaaaaatgattttggctaaagcggaaaaacaa
ttagaagcaattgatttacatacaactaaagtattggtattagccggggaagaatggcat
tcgggcgtcattggtattgtggcttctaggctggtggacaaatattataaaccggtaatt
atgattagtctgtgtgatggaataggcaaagggtcttgccgcagcatacctgcctttgac
atatatatggcgctaaatcattgctctgatctgttaacccagttcggtggtcatcgtcag
gccgcgggtctagtggtaccagcggaaaatatacaggcgttgcgtcagcgattgaatgat
cttgcggcgagtaccctgtcggcaacagattatgtacctgtccttactattgattctgtg
atatgtctggaggaaattggcgctccctttgttgaacaaatggcctgcctggaaccatat
ggcttcggtaatccaagcccggtatttgcctgccgggacgtagccctgggggaaaaaaga
tgtatcgggcagcagagccgccatctgaaactcaaactaaaaaacaatggggtgaaggat
gtaattgcctggaacatgggggaattgtccaacaaccttacctgcgacgaaaatattgat
ttagcatttgtgcctaaatttaatgagtggcagggacaaaaaaatttgcaattggtcgct
caggatatacgacaatcacttactagtcagacgcaagctgcgctaaatcaaattgcgcct
gatcgcgattgcattgtgcaagtatatttactcctaaaacaaagtaatcaatcaggacag
tataatttttttctgaaaaatatcatggataaaatttccgacaactatcatactgttata
tcggtaaaagtccttgaaacggttttaactattttaagggaattgcacttaataacaacc
aaagaaaaccaagaaagagatgagattaccattcagcttactcctgcaccaactaaaaaa
ctggatctaatggattcgcctacttttcggaactgcttaaaaatgcgtgctgagtacttg
gctgaaaatatttag
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