Sporomusa acidovorans: SPACI_051080
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Entry
SPACI_051080 CDS
T10566
Symbol
mrdA_4
Name
(GenBank) Peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sacv Sporomusa acidovorans
Pathway
sacv00550
Peptidoglycan biosynthesis
sacv01100
Metabolic pathways
sacv01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sacv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SPACI_051080 (mrdA_4)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SPACI_051080 (mrdA_4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sacv01011
]
SPACI_051080 (mrdA_4)
Enzymes [BR:
sacv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SPACI_051080 (mrdA_4)
Peptidoglycan biosynthesis and degradation proteins [BR:
sacv01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SPACI_051080 (mrdA_4)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DIP2116-like_N
Motif
Other DBs
NCBI-ProteinID:
XFO74997
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Position
complement(5294828..5296642)
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AA seq
604 aa
AA seq
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MWDERSRRIQILAVIVIGIILTLIFRLMWMQLFQGAQYKKIADQNRTRQITAQAPRGTIY
DRNGAVVVANRPSFAVSIIPSEYSNPQQSTPLLAALTGVTADQINQLLQATAEFPYTPVR
IKRDIDAATIAKIEERQDYLPGVLIEAIPVRQYVYKELAAHVLGYVGNISQEEYAARKDQ
GYHPNDLIGKDGLEQQWETVLRGIEGGRQLEVNAVGEDVRPLGNQPAVPGHALVLTLDAN
LQKAAEEALHTQVAASRTLGQQAKGGAVVVLDVKTGGLLVMASAPGFDPNQFASGIGSRE
WNQLLSNPNNPLTNRAIQSAYPPASVFKIVTSAAALEMQVTTPQEVFDDKGVYVLNGWSF
YGWETKGLGKLTVADALAWSSDPVFYELGNRIGVDNLAAYALTFGYGQATGIKLAGEEKG
LVPTAEWKQATYDEPWYPGETLIAAIGQGYYLATPLQQAVTAMTVANGGIAYRPVLVDKV
LTEDGNLVQKVEPEVIRTVYLRPEVWDIIRQGMTAVTTRGTGAAVFQGFPRTVAAKSGSA
ETGRGTTHSWFVCYAPAENPEIAMAVFVEEGGEGSMAAAPITRRVLEAYFGLPGKPSLPT
TRTD
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtgggacgagagaagccgacgaattcaaatactggcggttattgttatcggaatcatt
ttgactcttatttttcggctgatgtggatgcagttgtttcagggagctcagtataaaaaa
atagccgaccagaaccgtaccaggcagatcactgcccaggcgccgcgcggcacgatctat
gacagaaacggtgcggttgttgtagcgaacagaccaagcttcgccgtatcgatcattccc
agcgaatacagcaaccctcagcagtctacgccgcttttggcagcacttaccggcgtaacg
gcagaccaaattaatcaactgttgcaggctacggccgagtttccttatacgccggtacgc
attaaacgggatattgatgcagccacgattgccaaaattgaggagcgccaggactatctt
ccgggagtactcattgaagccatccccgttagacaatatgtatacaaggaactggccgcc
catgtactgggatatgtaggcaatatcagtcaggaagagtacgccgcccggaaagatcag
ggctaccatcccaacgatttaatcggcaaagacggcctggagcagcaatgggaaacggtg
ctgcgggggatagaaggcggacggcaactggaagtaaatgctgtcggggaggatgtgcgg
ccgttgggtaatcaaccggctgtacccggtcacgctctggtccttacactggatgcaaat
ttgcaaaaagccgccgaagaagctttacatacacaagtggcagcaagccgcacactggga
cagcaggcaaaaggaggtgccgttgtagtgcttgatgttaaaacaggcggtttgctggtt
atggccagcgccccgggttttgatcccaatcagtttgcgagcggtatcggtagccgggaa
tggaatcaactgctcagcaatccgaataaccccctgacaaaccgtgccattcaaagtgcg
tatccgccggcttccgtctttaaaatagtaacttctgcggctgctttggagatgcaggta
acgactccccaggaagtttttgatgataagggagtctatgtcctaaacggctggagtttt
tacggctgggagaccaaaggtctggggaaattaacggttgccgacgctctggcttggtcg
agcgaccctgtattttacgaactgggcaaccgtatcggcgtagataacttagccgcctat
gctttgacttttggttatggacaggcaacgggaattaagctggccggagaagaaaaaggt
ttggttccaactgctgaatggaagcaggcaacctatgatgaaccctggtatccgggtgaa
actttgattgccgccattggccagggctactatttagccacgccgttacagcaagctgta
acggctatgacagttgccaacggtggtatcgcttatcgacctgtgcttgtagacaaagtt
ttaaccgaagatggaaatctggtgcaaaaggttgagccggaggtcataagaacagtatat
cttagaccagaggtgtgggacattatccgtcagggaatgacagcagttaccactcgtggc
acgggggcagcggtatttcagggtttcccccgaacggtggcggcaaaatctggttcggct
gaaaccgggaggggaaccacgcattcgtggttcgtctgctatgcgccggcagaaaatccc
gagattgctatggccgtatttgtggaagaggggggggagggatcgatggccgccgcacca
attacccgccgggtattggaagcttattttgggttgccgggaaaaccgtcgctccctacg
accaggaccgattaa
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