Sporomusa acidovorans: SPACI_054090
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Entry
SPACI_054090 CDS
T10566
Symbol
ruvB_2
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sacv Sporomusa acidovorans
Pathway
sacv03030
DNA replication
sacv03430
Mismatch repair
sacv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sacv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPACI_054090 (ruvB_2)
03430 Mismatch repair
SPACI_054090 (ruvB_2)
03440 Homologous recombination
SPACI_054090 (ruvB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sacv03032
]
SPACI_054090 (ruvB_2)
03400 DNA repair and recombination proteins [BR:
sacv03400
]
SPACI_054090 (ruvB_2)
Enzymes [BR:
sacv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPACI_054090 (ruvB_2)
DNA replication proteins [BR:
sacv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPACI_054090 (ruvB_2)
DNA repair and recombination proteins [BR:
sacv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPACI_054090 (ruvB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_30
AAA_5
RuvB_N
TIP49
AAA_22
AAA_19
DnaX_C
AAA_assoc_2
AAA_7
AAA_2
AAA_24
Rad17
AAA_14
DUF815
AAA_16
RCF1-5-like_lid
Mg_chelatase
AAA_18
AAA_6
nSTAND3
Glyco_tranf_2_5
PIF1
AAA_28
RNA_helicase
Zeta_toxin
ABC_tran
Sigma54_activat
TsaE
Motif
Other DBs
NCBI-ProteinID:
XFO75293
LinkDB
All DBs
Position
complement(5603325..5605082)
Genome browser
AA seq
585 aa
AA seq
DB search
MAYVALYRKWRPQDFDNLVGQEHISLTLKNAITTGKIAHAYLFAGPRGTGKTSTAKILAK
ALNCQQGPTVNPCNNCSNCDKITAGTSMDVFEIDAASNRGIDEIRELRETVKFAPVDGRY
KVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFVLATTEPHKIPATIHSRCQRYDFRRIAT
KEIEQRLASVATQSNLKVDGEALRLIAVQADGGMRDALSILDQCATLDSGDTITAEHVRQ
LLGLIGHEWVWQLMDAIAERDAHTVLLKLDELICLGKDVRQFLLEMALHARSLMLYKAAP
SIDTIEVYSEDRKILAAQSAKFSHQELVKMLEVLHHAANETKWAAEPRIAVEMALITLCR
REAGSDVAGLLERVAALEAKLASLTISSTGVNPSVSARHAVPVQPPVGEPSSPVIQQPRE
GQPAQTTPVVRPSVPETKAAPGEVLAAQPEQEGATPTTDLKEVWTAVLKELLAHGKRSVH
ACVMQGHLAALTDKQATVRFAATFPKERTEKDDYRAIVEKTLAQISGHQVRLICALDSDT
PTVKPSVPANPAQPASEALTEDELNHPVIKQAQMMFGGKVVKIDD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctatgtagctttataccggaagtggcggccgcaggattttgacaatcttgttggt
caggagcatatcagccttactttgaaaaatgccattactaccggcaagattgcccatgct
tatttatttgccgggccgcgtggtacaggtaagaccagtactgccaagattctggccaag
gcgcttaattgtcagcaaggtcctactgtaaatccttgcaacaattgttccaattgtgat
aaaattaccgctggtacgtcaatggacgtttttgaaattgatgccgcttccaaccgggga
attgacgagatccgtgagctcagggaaactgttaaatttgcacctgttgacggtcgttat
aaggtgtatattattgatgaagtgcatatgctgacaacagaagcctttaacgccctgctg
aaaacccttgaggaaccgccggcacatgtggtatttgtactggcgacgacagagccgcat
aagatcccggcaacgattcattcgcgctgccagcgttacgattttcggcgaattgcaacc
aaggagattgaacagcggttagccagtgtggccacgcagagcaatcttaaggttgacggg
gaagcattgcggctgattgcggtgcaagcggacggtggtatgcgggatgctcttagtatc
ttggaccagtgcgccacattggacagcggcgatacgataacagcggaacatgtgcggcag
ttattaggcttgattgggcacgaatgggtatggcagcttatggatgctattgccgaacgt
gatgcccatactgtattattgaagctggatgaactgatttgtctgggtaaagatgttcgg
cagtttttgttggagatggcgctgcatgcccgcagtctgatgctgtataaagcagcgcct
tccattgatacgattgaagtgtatagtgaggatagaaagatactggccgcgcaaagtgcc
aagttcagccaccaggaactggtgaagatgctggaggtgttgcaccatgcagccaatgag
accaagtgggctgccgagccacgcatcgcggtggagatggcgctgattaccttatgccgc
cgggaagccggcagtgatgttgccggtttgcttgaacgggttgccgcactggaggccaaa
cttgccagtctgacaatatcctccaccggagttaaccccagcgtgagtgcccggcatgcg
gttccagtccagccgccggttggcgaaccgtctagtccggtaattcaacagcctcgtgag
gggcagccggcgcagacaacacctgttgtgcggccgtctgtacctgagactaaagccgct
cccggagaagttctcgcggcgcagcctgaacaggaaggcgccacgccgacaactgatctt
aaagaagtttggacggctgtgctcaaggaactgttagcccatggcaaacggtcggtgcat
gcttgtgtaatgcagggccatttagccgctctaacagataaacaggcgactgttcgtttt
gcggcaactttccccaaggagcgtaccgagaaagacgattaccgggcgattgtggaaaaa
acactggcacagatctcaggacatcaggtaaggcttatttgtgcattagactcggataca
cctactgttaaaccgtcagtaccggcgaacccggcacaaccggcttccgaagcgctgaca
gaggatgagcttaatcatccggtaatcaaacaggcgcaaatgatgtttggcggaaaagta
gttaagatagatgattaa
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