Sporomusa acidovorans: SPACI_054920
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Entry
SPACI_054920 CDS
T10566
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sacv Sporomusa acidovorans
Brite
KEGG Orthology (KO) [BR:
sacv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sacv03019
]
SPACI_054920 (yhaM)
Messenger RNA biogenesis [BR:
sacv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPACI_054920 (yhaM)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
XFO75372
UniProt:
A0ABZ3JBX4
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All DBs
Position
complement(5691090..5692049)
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AA seq
319 aa
AA seq
DB search
MKLGELVKNPKGFKITGIYRISRFEVKTARNGKAYGDCLISDHSFEVPAKYWDIPTERVA
LFQKNGVLRIDATLDYFKDSPQLTIESVFLPLPAEVDQSLSSLGMMAPRPIDDMYVELKS
IIANVGHEGLRKLLTGIFVDDRQFAEKFKRHPGAVKNHHAYIGGLLEHTLEVAVGALDYC
KRNDKIKRDILLAAALVHDIGKVREIEVDMLGMGIGFTREGKLLRHISLGLEMLESACQS
VGLEAEISLMLKHCILSHHGQAEWGSPVEPMFLEAELLHYLDNLSAKTEQFYREAERAEP
GGFNKSATLRREIYRPGWE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacttggggaattggttaagaatccaaaaggatttaaaataacagggatataccgg
atttcacggtttgaggttaaaaccgcgagaaacggtaaagcatatggcgattgcctgata
agcgatcatagctttgaggtgccggctaagtactgggatatacccactgaacgagtcgca
ttatttcagaagaatggtgtactgcgaattgacgctacgctggattattttaaagacagc
ccgcaattgacaattgagagtgtttttctgccgttgccggcggaagtcgaccagtctttg
agcagcctggggatgatggcaccgaggccgatagacgatatgtatgttgaactcaaaagc
ataattgccaatgtcgggcatgaaggcctgagaaagctgttaacaggtatttttgttgat
gaccggcaatttgctgaaaagtttaagcgtcatccgggtgccgtcaaaaatcatcatgcc
tatattggcggcttgcttgagcatacacttgaggttgcggtgggagctctcgattactgc
aagcgcaatgataagataaaaagggacattcttttggcagcggctttggttcatgatatc
ggcaaggtacgggaaatcgaagtagatatgctgggtatgggtataggtttcacccgggag
gggaaattgctgcggcatatttcgcttggcttggaaatgctggagagtgcctgtcagtcg
gtaggactggaggcagaaatcagtttaatgctcaagcattgtattctctctcatcacggg
caagctgagtggggaagtccggtagaacccatgtttttagaggcagaactgctgcattat
ctggataatctcagtgctaagacagaacaattttaccgtgaagccgagcgggcggagccc
ggaggttttaacaaaagcgcaacactgcggcgggagatatatcgtccgggttgggagtaa
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