Saccharothrix sp. 6-C: IOD16_01000
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Entry
IOD16_01000 CDS
T09941
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
IOD16_01000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacx03400
]
IOD16_01000
Enzymes [BR:
sacx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
IOD16_01000
DNA repair and recombination proteins [BR:
sacx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
IOD16_01000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
PUB_1
Motif
Other DBs
NCBI-ProteinID:
QQQ77171
LinkDB
All DBs
Position
complement(205329..205538)
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AA seq
69 aa
AA seq
DB search
MSEPGYEQARDELVEVVRRLEAGGLSLEDSLALWERGEALAKTCERQLAGARERIDQALS
VTEEDVAEV
NT seq
210 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagccgggctacgagcaggccagggacgagttggtggaggtggtccgcaggctg
gaggcgggagggctgtcgctggaggactcgctggcgctgtgggaacgcggcgaggccctg
gcgaagacgtgcgagcggcagctcgcgggcgcccgggagcggatcgatcaagcactcagt
gtgaccgaggaggacgtggccgaggtgtga
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