Saccharothrix sp. 6-C: IOD16_01045
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Entry
IOD16_01045 CDS
T09941
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sacx
Saccharothrix sp. 6-C
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacx03400
]
IOD16_01045
DNA repair and recombination proteins [BR:
sacx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IOD16_01045
Archaeal homologous recombinant proteins
IOD16_01045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QQQ77179
LinkDB
All DBs
Position
complement(218005..219147)
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AA seq
380 aa
AA seq
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MKILHTSDWHVGRTFHGRDLLQEQESVLGGLADTVSDERVDAVVVAGDLFDRAVPNAEAV
AVCSRVLKRIREAGAKIVITPGNHDSAARLGFLGAFAEAGGLHLRTRVAELHDPVLFADE
HGPVAVYGIPFLEPETARHALGVEAKGHGGVLTEAMRLVKQDLAARGNTRSVVLAHAFVT
GGEPCESERTIAVGGVQDVSGAVFAGVDYVALGHLHGQQTLAEHLRYSGSPVAYSFSEAR
HRKSVWLVELDAGGLAGARRHSLPVPRALSTLSGALEDLLLDPAHEPVEDHFLSVTLTDR
VRPLDALRRLQKRFPHAVHVEWRPEGGRTGELRFAERVRGRDDEEIACCFVEDVRGEQPN
PRELDLLREAFAAAAREDEA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatcctgcacacgtccgactggcacgtggggcgcaccttccacggccgtgacctg
ctgcaagagcaggagtcggtgctcggcggcctcgccgacaccgtgtcggacgagcgggtg
gacgcggtcgtggtggcgggagacctgttcgaccgggcggtgccgaacgcggaagccgtc
gcggtgtgctcccgggtgctcaagcgcatccgcgaggccggcgcgaagatcgtgatcacg
cccggcaaccacgactcggcggcccggctgggcttcctgggcgcgttcgccgaggcgggc
ggcctgcacctgcgcacgcgcgtggccgagctgcacgacccggtgctgttcgccgacgag
cacggcccggtcgcggtgtacgggatcccgttcctggagccggagacggcgcggcacgcg
ctcggcgtggaggccaagggccacggcggcgtgctcaccgaggcgatgcggctggtcaag
caggacctggcggcccgcgggaacacgcggtcggtcgtgctcgcgcacgcgttcgtcacc
ggcggcgagccgtgcgagtcggagcgcaccatcgcggtgggcggggtgcaggacgtgtcg
ggcgcggtgttcgccggggtcgactacgtggcgctgggccacctgcacgggcagcagacg
ctggcggagcacctgcggtactcgggcagcccggtggcgtactcgttctccgaggcgcgg
caccgcaagtcggtgtggctggtcgagctggacgcgggcgggctcgccggggcgcggcgg
cactcgctgccggtgccccgcgcgctgtcgacgctgagcggcgcgctcgaggacctgctg
ctggacccggcgcacgagccggtggaggaccacttcctgtccgtcacgttgaccgaccgg
gtgcggccgctggacgcgttgcgccggctgcagaagcggttcccgcacgcggtgcacgtg
gagtggcggccggagggcgggcggaccggtgagctgcggttcgccgaacgggtgcgcggg
cgcgacgacgaggagatcgcctgctgcttcgtcgaggacgtgcgcggcgagcagccgaac
ccgcgggaactcgacctgctgcgcgaggcgttcgccgcggcggcccgggaggacgaggcg
tga
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