Saccharothrix sp. 6-C: IOD16_03170
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Entry
IOD16_03170 CDS
T09941
Name
(GenBank) DEAD/DEAH box helicase
Organism
sacx
Saccharothrix sp. 6-C
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD_2
ERCC3_RAD25_C
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QQQ77541
LinkDB
All DBs
Position
complement(677883..680798)
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AA seq
971 aa
AA seq
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MLVLHALGVGSGRVGVWAEDSLSPERVGGRLPRRAVGHPFAVGGEGLVRLVGGVVGEVAL
RLPSHAGGPVGSPELVRETSGGRRGALRWREWVVPVVWVDGVGGALPPDCRAGASWKFLD
DVLGFGRELVRRGRVLPSLDGDGFARWRAALSGVDSLRFAALRASAPPSFRASDGPGELV
QEVLDRAVDREVRAALRGARPGGDGVVGQWLDALVDEPRVVGEVGALRAKVAAWRANGLQ
QSPVRTCFRLSSPDQGGMAKDGWRVEFLLQAVDEPSVVVTAEQLWHKQDAVLRRWVGRPE
DVLLGDLGRAGRLYPALDRALSARRPVELELDVEGAYDFLQHAAVLAEAGFGVMLPSWWR
QPHRLGLRLTATSRGTAGQVAKESELGLKVLVDYKWELAVGDERLTEAELQSLAEAKVPL
VRVRGQWVHVDPKRLAAGLAFLKRGGGQMTAAQVLLHSGLHPEDADLPLPLNGVSATGWL
GDLLSGEVEHHLEPVARPKGLVAELRPYQARGLAWLAFLDRLGLGACLADDMGLGKTVQL
LALEAHNRAHGKRLPTLLVCPMSVVGNWQREAARFTPGLEVRVYHGAERALDTDCDIVIT
TYAVVARDAGKLADVSWDRVVLDEAQNIKNSSTRQSKVVRALPARHRVALTGTPVENRLA
ELWSIMDFVNPGVLGTVNTFRARFAVPVERHHDEDAAVRLRRITGPFVLRRLKTDPRIIT
DLPDKIEVKQLCTLTPEQATLYQAVVDDMLAKIAEAEGVKRKGLVLATMSRLKQVCNHPA
QLLGDGSRVAGRSGKLARLEEVLDEALADGDKALCFTQFTAFGSLVVPHLAARFDTEVLY
LHGGTTKRQRDEMVRRFQAEDGPSIFVLSLKAGGTGLNLTAANHVIHLDRWWNPAVEDQA
TDRAFRIGQRNHVQVRKFVCVGTLEERIDRMIEEKRGLAQLVVGAGEDWLTEMSTGELRE
LFALSGEAVGD
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
gtgctggtgttgcatgcgttgggcgtgggcagtgggcgggtcggggtttgggcggaggat
tcgctctcgccggagcgggtcggcgggaggttgccccggcgggcggtcgggcatccgttc
gcggtcggcggggaagggcttgtccggttggtcggtggggtggtcggggaggttgccctt
cgactcccttcccacgcgggtgggccggtggggtcgccggagttggtccgggagacctcc
ggcggccggcggggcgctctgcggtggcgggagtgggtggttcccgtcgtgtgggtggac
ggggtgggcggcgcattgccgccggactgccgggctggggcttcgtggaagttcctggac
gacgtcctcgggttcgggcgggagctggttcggcgcggccgggtgctgccgtcgttggac
ggggacgggttcgcgaggtggcgggccgcgttgtccggggtggactcgttgcggttcgcc
gcgctgcgggcgagtgcgccgccgtcgttccgggcctccgacgggcctggcgagctggtc
caggaagtgctggatcgcgcggtcgaccgtgaggtcagggccgcgctgcggggcgcccgg
ccgggtggtgacggggtcgtcgggcagtggttggacgcgttggtggacgaaccgcgcgtg
gtcggcgaagtgggcgcgctgcgggccaaggtggcggcttggcgggccaacgggttgcag
cagagtccggttcggacctgcttccggctcagctcacccgaccagggcggcatggcgaag
gacgggtggcgggtcgagttcctgctccaggccgtggacgaaccgagtgtcgtggtgacc
gcggaacagttgtggcacaagcaggacgccgtcctgcggcggtgggtcggccggcccgag
gacgtgctgctcggcgacctcggccgggccgggcggctctacccggcgctggaccgggcg
ctctccgcccgccggccggtggagctggaactggacgtggaaggcgcgtacgacttcctc
cagcacgcggcggtgctggcggaggccgggttcggcgtgatgctgccctcgtggtggcgc
caaccccaccggctcgggctccggctcacggccaccagccgcggcacggcgggtcaggtc
gcgaaggagagcgagctggggctgaaggtcctggtcgactacaagtgggagctggcggtc
ggcgacgagcggctgaccgaggccgagctccagtccctcgccgaggccaaggtgccgctg
gtccgggtccgcggccagtgggtgcacgtcgacccgaagcgcctcgccgccggcctcgcc
ttcctcaagcggggcggcgggcagatgaccgccgcgcaggtcctgctgcactccggcctg
caccccgaggacgccgacctgcccctcccgctgaacggggtcagcgccaccggctggctc
ggcgacctgctctccggcgaggtcgagcaccacctggagccggtcgcgcggccgaagggg
ctggtcgccgagctgcggccctaccaggcacggggactggcctggctcgcgttcctcgac
cggctgggcctgggcgcgtgcctggccgacgacatgggcctcggcaagaccgtgcaactc
ctggcactcgaagcgcacaaccgcgcgcacggcaagcgcctgccgacgttgctggtctgc
ccgatgtccgtggtcggcaactggcaacgcgaggccgcccgcttcacacccgggctggag
gtgcgcgtctaccacggcgcggagcgcgcgctcgacaccgactgcgacatcgtcatcacc
acctacgcggtcgtcgcgcgcgacgcggggaagctcgccgacgtgagctgggaccgagtc
gtgctggacgaggcgcagaacatcaagaacagctccacccggcagtcgaaggtggtgcgc
gcgctgcccgcccggcaccgcgtggcgctgaccggcacgccggtggagaaccggctggcc
gagctgtggtcgatcatggacttcgtcaaccccggcgtcctgggcacggtcaacacgttc
cgcgcccgcttcgccgtgcccgtcgaacgccaccacgacgaggacgccgccgtccgcctg
cgccggatcaccggcccgttcgtgctgcgccgcctcaagaccgacccgcggatcatcacc
gacctgccggacaagatcgaggtcaagcagctgtgcacgctgacccccgagcaggccacg
ctctaccaggccgtggtggacgacatgctggccaagatcgccgaggcggagggcgtcaag
cgcaagggcctggtcctggccacgatgtcgcgcctcaagcaggtctgcaaccacccggcg
cagctcctcggcgacggctcgcgcgtcgccggccgctccggcaagctcgcccggttggag
gaggtcctggacgaggcgctggccgacggcgacaaggcgttgtgcttcacccagttcacc
gccttcggctcgctggtggtgccccacctggccgcgcggttcgacaccgaggtcctctac
ctgcacggcggcacgacgaagcggcagcgcgacgagatggtgcggcggttccaggccgag
gacggcccgtcgatcttcgtgctgtcgctcaaggcgggcggcacggggctgaacctgacc
gccgccaaccacgtcatccacctcgaccgctggtggaacccggccgtcgaggaccaggcc
accgaccgggcgttccggatcggccagcgcaaccacgtgcaggtgcgcaagttcgtctgc
gtcggcaccttggaggagcggatcgaccgcatgatcgaggagaagcgcgggttggcgcag
ctggtggtcggcgccggcgaggactggctgaccgagatgtcgaccggtgagctgcgggag
ctgttcgccctgtccggggaggccgtcggtgactga
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