Saccharothrix sp. 6-C: IOD16_03190
Help
Entry
IOD16_03190 CDS
T09941
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sacx
Saccharothrix sp. 6-C
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacx03400
]
IOD16_03190
DNA repair and recombination proteins [BR:
sacx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
IOD16_03190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF6890
Motif
Other DBs
NCBI-ProteinID:
QQQ77544
LinkDB
All DBs
Position
complement(683012..683455)
Genome browser
AA seq
147 aa
AA seq
DB search
MSHHGGVPNLETTDDVRARMSKQRSRDTGIEVALRRELHRLGLRYRVHQRPVRAVRREAD
VVFGPAKVAVFVDGCFWHGCPEHGTWPKRNGEFWRTKIETNRARDANTDQVLADAGWLAV
RVWEHEDPSVAASRVRATVLGRRGRLA
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcatggcggggtgccgaacctggagacgacggacgacgtccgcgcccggatg
agcaagcagcgttcccgggacacgggcatcgaggtggcgttgcggcgcgagctgcaccgg
ctggggctgcggtaccgggtgcaccagcggcccgtgcgcgcggtgcggcgtgaggcggac
gtggtgttcgggcccgccaaggtggcggtgttcgtggacgggtgcttctggcacggctgc
ccggagcacggcacgtggcccaagcgcaacggcgagttctggcggaccaagatcgagacg
aaccgggcgcgggacgcgaacaccgaccaggtgctggcggacgcgggctggctcgcggtg
cgggtgtgggagcacgaggacccgtccgtcgcggcgagtcgggtgcgggccacggtgctg
gggcggcgcggtcggctagcctga
DBGET
integrated database retrieval system
