Saccharothrix sp. 6-C: IOD16_03245
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Entry
IOD16_03245 CDS
T09941
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IOD16_03245 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sacx03019
]
IOD16_03245 (orn)
03009 Ribosome biogenesis [BR:
sacx03009
]
IOD16_03245 (orn)
Messenger RNA biogenesis [BR:
sacx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IOD16_03245 (orn)
Ribosome biogenesis [BR:
sacx03009
]
Eukaryotic type
Pre-60S particles
RNases
IOD16_03245 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QQQ77553
LinkDB
All DBs
Position
complement(693650..694261)
Genome browser
AA seq
203 aa
AA seq
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MMDRLVWIDCEMTGLDLGKDALIEIAALVTDAELNVLGDGVDVVIHADDTALDSMPDVVM
QMHAKSGLTEEVRRSTVSLADAEAQVLAYIKEWVPDPRTAPLAGNSIATDRGFIARDMPE
LDAHLHYRMVDVSSIKELCRRWYPRIYYAQPGKGLAHRALADIKESIRELAYYRRTAFVP
QPGPSSEQAQAVATELLAADGPE
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtgatggatcgcttggtgtggatcgactgcgagatgacaggcctcgacctgggcaaggac
gccttgatcgagatcgcggcgctggtgaccgacgcggagctgaacgtgctcggcgacggg
gtcgacgtggtgatccacgccgacgacacggcgctcgactcgatgccggacgtcgtcatg
cagatgcacgccaagtcggggctcaccgaggaggtgcggcgctcgaccgtgtcgctcgcc
gacgccgaggcccaggtgctggcctacatcaaggagtgggtgccggacccccgcaccgct
cccctggcgggcaactcgatcgccaccgaccgcgggttcatcgcccgcgacatgcccgag
ctcgacgcccacctgcactaccggatggtcgacgtgtcgtcgatcaaggagctgtgccgg
cgctggtacccgcgcatctactacgcgcagccgggcaagggcctggcccaccgcgcgctc
gccgacatcaaggagtcgatccgcgagctggcgtactaccggcgcacggcgttcgtgccg
caaccagggccgtcgtcggagcaggcgcaggccgtcgccaccgaactgctggccgccgac
ggcccggaatag
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