Saccharothrix sp. 6-C: IOD16_03315
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Entry
IOD16_03315 CDS
T09941
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx02024
Quorum sensing
sacx03060
Protein export
sacx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
IOD16_03315 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IOD16_03315 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IOD16_03315 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sacx02044
]
IOD16_03315 (secD)
Secretion system [BR:
sacx02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
IOD16_03315 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecD_1st
SecDF_P1_head
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
QQQ77565
LinkDB
All DBs
Position
708700..710868
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AA seq
722 aa
AA seq
DB search
MPRPSARRALLVRGLIALGVLAASAFTLLTVQPRLGLDLRGGTQIVLETPSEASSEATDR
AMEVLRRRVDELGVAEPVLARSGDHRIVVELPGVQDPTEAIEVLGRTAQLRVQPVTGLGD
VPTPEGDAISLGEAVMTGEGIEDARATPNPQGVGYLVGVDFQGDAPQAWQRVTAEAACSP
PGDPARRVAFVLDGEVVSAPQVDVSTVCGTGMVGGSTSITGRFNQAEAEELALVIRSGAL
PVPVEVVEQRTVGPTLGAEAIEASARAAIIGVALTGLFLVFAYRLAGLLAVLALAGYAGL
AYAAMLAIGATFTLPGLAGFVLAIGMAVDANVLVFERSREEYARRKRLPRSVDEGFRGAF
SAVADSNVTTLLAAGLLFWLATGPVKGFGVTLSIGVLASLFSALVLSRVLLHLAMPLLRW
RPTWSGLHTLGRVRTWLTSRGITLFRRPRRWLLAAGLVLLAAVGGLVLRGLELGVEFTGG
RMLEFTASPTDSGSVDTGRVRAELASAGFPDAVVVTSGSDGVSVRTGPIDSAAAVRLGEA
VDRATGGAEQVSNELIGPSLGSELRRNALIALAIAVAAQLVYLAVRFDWRLGVATVVALV
TDVVVLVGAFAWLGKTADGVFLAALLTVIGYSVNDSVVVFDRVRELRRTRAPFTEVMSSA
VLQTLPRTVNTGIGVLFVLAALLVLGDGSLADFSTALLIGVVAGTVSTAVTAAPVAIVLE
KR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccccagcgcgcggcgagcgctactcgtccgtgggctgatcgccctcggcgtg
ctcgccgcgtccgccttcaccctgctcaccgtccaaccacgcctcggcctcgacctgcgc
ggcggcacccagatcgtgctcgaaaccccgtccgaggccagctccgaggccaccgaccgg
gcgatggaggtgctgcgccgccgggtcgacgaactgggcgtcgccgaacccgtgctggcc
cgctccggcgatcaccgcatcgtggtggagctgcccggcgtgcaggacccgaccgaggcc
atcgaggtgctcggccgcaccgcccagctgcgcgtgcagccggtgaccgggctcggcgac
gtgcccacgcccgaaggcgacgcgatcagcctcggcgaggccgtgatgaccggcgagggc
atcgaggacgcccgcgccacgcccaacccgcaaggcgtcggctacctcgtcggcgtcgac
ttccaaggtgacgcgccgcaggcgtggcagcgggtgaccgccgaggccgcgtgctcaccg
ccgggcgaccccgcgcggcgggtggcgttcgtgctggacggcgaggtcgtgtccgcgccg
caggtggacgtgtcgacggtgtgcggcaccggcatggtcggcggcagcacgtcgatcacc
gggcggttcaaccaggccgaggccgaggagctggcgctggtgatccggtccggcgcgctg
cccgtgccggtcgaggtggtggagcagcggaccgtcgggccgacgctcggcgcggaggcg
atcgaggccagcgcccgggcggccatcatcggcgtggcgctgaccgggctgttcctggtg
ttcgcctaccggctggccgggctcttggccgtgctggcgctggccgggtacgcgggcttg
gcgtacgcggcgatgctggcgatcggcgcgacgttcacgttgccggggttggccgggttc
gtgctggccatcggcatggcggtggacgcgaacgtgctggtgttcgagcggtcgcgggag
gagtacgcgcggcgcaagcgcctgccgcggtcggtggacgaggggttccgcggcgcgttc
agcgcggtggcggactcgaacgtgaccacgctgctggccgccgggttgctgttctggctg
gccaccggaccggtgaaggggttcggcgtcaccctgtccatcggtgtgctggcctcgctg
ttcagcgccttggtgctgagccgggtgctgctgcacctggccatgccgctgctgcgctgg
cggccgacgtggagcgggctgcacacgctgggccgggtgcgcacctggctgacctcgcgc
gggatcacgttgttccggcgcccgcggcggtggctgctcgccgccggactcgtcctgctc
gcggcggtcggcgggctggtgctgcgcgggttggagctcggggtggagttcaccggcggt
cggatgctggagttcaccgcttccccgacggacagcggctcggtggacaccggacgggtg
cgcgcggagctggcgtccgccgggttccccgacgcggtcgtggtcacctcgggctcggac
ggcgtctcggtgcgcacgggaccgatcgactcggccgccgccgtgcggctcggcgaggcc
gtggaccgcgcgaccggtggggcggagcaggtcagcaacgagctgatcggccccagcctc
ggctcggagctgcggcgcaacgcgttgatcgcgctggccatcgcggtggccgcgcagctg
gtctacctggccgtccggttcgactggcggctcggcgtggccaccgtggtcgcgctggtc
acggacgtggtcgtgctggtcggggcgttcgcgtggctgggcaagacggccgacggcgtg
ttcctggccgcgctgctcaccgtgatcgggtactcggtgaacgactcggtggtggtgttc
gaccgggtgcgcgagctgcggcggacgcgggcgccgttcaccgaggtgatgagctcggcg
gtgctccagaccctgccgcggacggtgaacacgggcatcggcgtcctgttcgtcctggcc
gccctgctggtgctgggcgacggctcgctggccgacttctccaccgcgctgctgatcggc
gtcgtcgccggcacggtctcgaccgcggtgaccgccgcaccggtggccatcgtgctggag
aagcgatga
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