Saccharothrix sp. 6-C: IOD16_03870
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Entry
IOD16_03870 CDS
T09941
Name
(GenBank) translation initiation factor IF-2 N-terminal domain-containing protein
Organism
sacx
Saccharothrix sp. 6-C
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
RD3
Motif
Other DBs
NCBI-ProteinID:
QQQ77659
LinkDB
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Position
838792..841737
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AA seq
981 aa
AA seq
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MSNTEKPAGAAGGGNATSAHPDLADLPAKLRVHALAKLLGASSKDVVAALADLGETVKGA
QSSVSRDLALKVAESLLAWDDIVTGEVDEQTEEPVRVTRDVAPLVPLFAPPSAVFLPPTP
VVKEVPASRDEDLDDTEDDADDHASADDAGDEGEGRRRRRRGRRGRGRGKGVGDENGDDE
TGEEPAEAVEAEAEAADESADDEGPGSRRRRRRRRRKTGAEEEAAPSEDDPPNTVVHVRE
PARDARDDKADSEAAQSEVRSVRGSTRLEAKRQRRRDGREAGRRRAPVLSEAEFLARREA
VERTMVVRERGDRTQIGVLEDGVLVEHFVTSSGTGSLVGNVYLGRVQNVLPSMEAAFIDI
GRGRNAVLYAGEVDWDAAGLEGKARKIEQALSTGDSVLVQVTKDPVGHKGARLTTQISLP
GRFLVYVPGGGATGISRKLPDNERKRLKDILKRVVPEDAGVIIRTASEGIAEEELARDVT
RLQAQWQVIKDKADTPKAQAPQLLYEEPDLLVKVVRDLFTEDFAALVVQGSDAWETIDGY
VRHVAPDLQERLRKHVGNSDAFTEYRIDEQLLKALDRKVWLPSGGYLVIDRTEAMTVIDV
NTGKFTGSGGNLEETVTRNNLEAAEEIVRQLRLRDVGGIIVIDFIDMVLESNRDLVLRRL
TECLGRDRTRHQVAEVTSLGLVQMTRKRVGTGLLEAFSTTCEHCRGRGLVVTTEPMHSHG
NGGGGGGQQAQQQSQQQQQGGGRKSRRAKHADVPEPVAEQTVEPTEEPEAIAEQPTSVEP
VSALLEEEAAPETPKRDRRQRRRARREAGAVVKHGDEEPESSTAPEQSAPEQSEPEAPEQ
SGQSAAQPVAVQPVVEQPVAAPVVERPVVEQAAPAPVAAADTAQQAVEAPSAPVAEPVKT
GRTRRRVTKPAMVPEPVTPPVAVTPVEVPPAPRASAPAPVAEQPVNGHVEPSAPAVTTRR
RAARRAASRPAGPPLDGAKES
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgaacacggaaaagcctgccggcgccgccggcgggggtaacgccacatccgcacac
ccggatctggcggatctgcccgccaagctgcgggtgcacgcgctggccaagctgctcggc
gcgagcagcaaggacgtggtggccgccctcgccgacctcggcgagacggtcaagggcgcg
cagtcgagcgtgagccgcgatctcgcgctcaaggtcgccgagagcctcctggcctgggac
gacatcgtcaccggcgaggtggacgagcagaccgaggaaccggtgcgggtgacccgcgac
gtggcgccgctggtgccgctgttcgcgccgccgtccgcggtgttcctgccgccgaccccg
gtggtcaaggaggtcccggcgagccgggacgaagacctcgacgacaccgaggacgacgcc
gacgaccacgcgtccgccgacgacgccggtgacgagggcgaaggccgccgtcgccgtcgc
cgcggccgtcgtgggcgcggtcgcggcaagggcgtcggcgacgagaacggcgacgacgag
accggcgaggagccggccgaggccgtcgaggccgaagccgaggccgccgacgagtcggcc
gacgacgagggcccgggcagccgccgtcgccgtcgtcgccgtcgccgcaagaccggcgcc
gaggaagaggccgcgccgagcgaggacgacccgccgaacaccgtcgtccacgtccgcgag
cccgctcgtgacgcccgtgacgacaaggccgactccgaggccgcgcagagcgaggtgcgc
agcgtccgcgggtcgacccggctggaggccaagcgccagcgccgccgcgacggccgcgag
gcgggccgccgccgcgcccccgtgctgtccgaggccgagttcctggcccgccgcgaggcc
gtggagcgcacgatggtggtgcgcgagcgcggcgaccgcacgcagatcggcgtgctggag
gacggcgtcctggtcgagcacttcgtgacctcctcgggcaccggctcgctggtcggcaac
gtctacctcggccgggtgcagaacgtgctgccctcgatggaggcggcgttcatcgacatc
ggccgcggccgcaacgcggtgctgtacgcgggcgaggtcgactgggacgcggccggcctg
gagggcaaggcccgcaagatcgagcaggccctctcgaccggcgacagcgtgctggtgcag
gtcaccaaggacccggtcggccacaagggcgcccggctgaccacccagatcagcctgccc
ggccgcttcctggtgtacgtgcccggcggcggcgcgaccggcatcagccgcaagctgccc
gacaacgagcgcaagcgcctcaaggacatcctcaagcgcgtcgtccccgaggacgcgggc
gtcatcatccgcaccgcctcggagggcatcgccgaggaggagctggcccgcgacgtcacc
cgcctgcaggcgcagtggcaggtcatcaaggacaaggccgacacgcccaaggcccaggcg
ccgcagctgctgtacgaagagccggacctgctggtgaaggtcgtgcgcgacctgttcacc
gaggacttcgccgcgctcgtcgtccagggctcggacgcgtgggagaccatcgacggctac
gtccggcacgtcgcgcccgacctccaggaacggctgcgcaagcacgtgggcaacagcgac
gcgttcaccgagtaccgcatcgacgagcagctgctcaaggcgctggaccgcaaggtctgg
ctgccgtcgggcggctacctggtcatcgaccgcaccgaggcgatgacggtcatcgacgtc
aacaccggcaagttcaccggatcgggtggaaacctcgaggagacggtgacccggaacaac
ctggaggcggccgaggagatcgtccgccagctcaggttgcgcgacgtcggcggcatcatc
gtgatcgacttcatcgacatggtgctggagtcgaaccgcgacctggtgctgcgccggctg
accgagtgcctcggccgcgaccgcacccgccaccaggtggcggaggtgacgtcgctgggt
ctggtgcagatgacgcgcaagcgggtcggcaccggcctgctggaggcgttctcgacgacc
tgcgagcactgccgcgggcgtggcctggtcgtcacgaccgagccgatgcactcgcacggc
aacggtggcggcggcggtggccagcaggcccagcagcagtcccagcaacagcagcagggt
ggcggccgcaagtcgcgccgcgccaagcacgcggacgtcccggagcccgtggccgagcag
accgtggagccgaccgaggagcccgaggcgatcgcggagcagccgacgtcggtcgagccc
gtgtccgccctgctggaggaggaggccgcgccggagaccccgaagcgcgaccgccgccaa
cgccgccgggcccgccgcgaggccggtgcggtcgtcaagcacggcgacgaggagcccgag
tcgtcgacggcccccgagcagtccgcgcccgagcagtccgagccggaggcgcctgagcag
tccgggcagtccgctgcccagccggtcgccgtccagccggtcgtcgagcagcccgtcgcc
gcgccggtcgtcgaacggccggtcgtcgagcaggcggctcccgccccggtcgcggccgcg
gacacggcgcagcaggccgtcgaggcaccctcggcgcccgttgccgagcccgtcaagacc
gggcggacccggcggcgggtgaccaagcccgccatggtgcccgagcccgtcaccccgccc
gtcgcggtgacgccggtggaggtcccgcccgcccctcgggcgagcgcgccggcgccggtc
gccgagcagccggtcaacggccacgtcgagccgagcgcgcccgcggtgaccacgcgtcgc
cgcgcggctcgccgggccgcctcccggcccgccggcccgccgctggacggggccaaggag
agctga
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