Saccharothrix sp. 6-C: IOD16_04780
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Entry
IOD16_04780 CDS
T09941
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx00010
Glycolysis / Gluconeogenesis
sacx00020
Citrate cycle (TCA cycle)
sacx00260
Glycine, serine and threonine metabolism
sacx00280
Valine, leucine and isoleucine degradation
sacx00310
Lysine degradation
sacx00380
Tryptophan metabolism
sacx00620
Pyruvate metabolism
sacx00630
Glyoxylate and dicarboxylate metabolism
sacx00640
Propanoate metabolism
sacx00670
One carbon pool by folate
sacx00785
Lipoic acid metabolism
sacx01100
Metabolic pathways
sacx01110
Biosynthesis of secondary metabolites
sacx01120
Microbial metabolism in diverse environments
sacx01200
Carbon metabolism
sacx01210
2-Oxocarboxylic acid metabolism
sacx01240
Biosynthesis of cofactors
Module
sacx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sacx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sacx_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
sacx_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sacx_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
IOD16_04780 (lpdA)
00020 Citrate cycle (TCA cycle)
IOD16_04780 (lpdA)
00620 Pyruvate metabolism
IOD16_04780 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
IOD16_04780 (lpdA)
00640 Propanoate metabolism
IOD16_04780 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IOD16_04780 (lpdA)
00280 Valine, leucine and isoleucine degradation
IOD16_04780 (lpdA)
00310 Lysine degradation
IOD16_04780 (lpdA)
00380 Tryptophan metabolism
IOD16_04780 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
IOD16_04780 (lpdA)
00670 One carbon pool by folate
IOD16_04780 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sacx04147
]
IOD16_04780 (lpdA)
Enzymes [BR:
sacx01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
IOD16_04780 (lpdA)
Exosome [BR:
sacx04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
IOD16_04780 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
HI0933_like
GIDA
DAO
FAD_oxidored
FAD_binding_2
AlaDh_PNT_C
3HCDH_N
NAD_binding_8
2-Hacid_dh_C
Thi4
NAD_binding_7
Amino_oxidase
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QQQ77817
LinkDB
All DBs
Position
complement(1020818..1022188)
Genome browser
AA seq
456 aa
AA seq
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MTDTSADLVILGGGSGGYACAFRAAELGLSVILVEKDKLGGTCLHRGCIPTKALLHAAEV
ADNAREGDQFGVKSSLEGIDIAGVNSYKDGVVSRLYKGLQGLVKANKVTLVEGAGRFVGP
NTVEVDGQRYTGKNVVLATGSYARSLPGLEIGGRVVTSDQALNLDFIPEKVVVLGGGVIG
VEFASVWASFGADVTIVEALPRLVPAEDEYASKQLERAFRRRGIKFKTGVKFTGATQNES
GVAVTLESGDVLDADLLLVAVGRGPNTAGHGYEEAGVRMERGFVTTDERLRTSVPGVYAV
GDIVPGLQLAHRGFQQGIFVAEDIAGQNPKVIDEAGIPRVTYCKPEVASVGLSEAAAKEK
YGSVETFVYDLAGNGKSQILKTAGGVKLVKAPDGPVVGVTMVGERVGELIGEAQLIYSWE
AYPEDVAPLIHAHPTQTEALGEAFLALAGKPLHVHG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacacctccgccgaccttgtgatcctcggtggcggctcgggcggctacgcctgc
gcgttccgcgcggccgagctcggcctgtccgtcatcctggtcgagaaggacaagctgggg
ggcacgtgcctgcaccgcggctgcatcccgaccaaggcgctgctgcacgcggcggaggtc
gcggacaacgcgcgcgagggtgaccagttcggcgtgaagtcctccctggagggcatcgac
atcgcgggcgtcaactcctacaaggacggcgtcgtcagccggctctacaagggactccag
ggcctggtcaaggccaacaaggtgaccctggtcgagggcgcgggcaggttcgtcggcccg
aacaccgtcgaggtggacggtcagcgctacaccggcaagaacgtcgtgctggcgaccggt
tcgtacgcccgcagcctgcccggtctggagatcggcggccgggtcgtcacgagcgaccag
gcgctcaacctggacttcatcccggagaaggtcgtcgtgctcggcggcggcgtgatcggc
gtcgagttcgccagcgtgtgggcctccttcggcgcggacgtgaccatcgtcgaggcgctg
ccccgcctggtcccggccgaggacgagtacgcgtccaagcagctcgagcgcgccttccgc
cgtcgcggcatcaagttcaagaccggcgtgaagttcaccggcgcgacgcagaacgagtcg
ggcgtggcggtcacgctcgagtccggcgacgtgctcgacgccgacctgctgctggtggcc
gtcggccgcggccccaacaccgccggccacggctacgaggaagccggcgtgcggatggag
cgcggtttcgtcaccaccgacgagcggctgcgcacgagcgtcccgggcgtgtacgccgtc
ggcgacatcgtgcccggcctgcagctcgcgcaccgcggcttccagcagggcatcttcgtc
gccgaggacatcgccgggcagaacccgaaggtcatcgacgaggcgggcatcccgcgcgtc
acctactgcaagcccgaggtcgcgtcggtcggcctctccgaggcggcggccaaggagaag
tacggttcggtcgagacgttcgtctacgacctcgcgggcaacggcaagagccagatcctg
aagaccgccggcggtgtcaagctcgtcaaggcgcccgacggcccggtggtcggtgtcacc
atggtcggcgagcgggtcggcgagctgatcggtgaggcccagctcatctacagctgggag
gcctaccccgaggacgtggctccgctgatccacgcccacccgacccagacagaagccctc
ggcgaggctttcctcgccttggccggcaagccgctgcacgtgcacggctga
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