Saccharothrix sp. 6-C: IOD16_04990
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Entry
IOD16_04990 CDS
T09941
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx00061
Fatty acid biosynthesis
sacx00071
Fatty acid degradation
sacx01100
Metabolic pathways
sacx01212
Fatty acid metabolism
sacx02024
Quorum sensing
sacx04146
Peroxisome
Module
sacx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IOD16_04990
00071 Fatty acid degradation
IOD16_04990
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IOD16_04990
09145 Cellular community - prokaryotes
02024 Quorum sensing
IOD16_04990
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sacx01004
]
IOD16_04990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sacx04147
]
IOD16_04990
Enzymes [BR:
sacx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
IOD16_04990
Lipid biosynthesis proteins [BR:
sacx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
IOD16_04990
Exosome [BR:
sacx04147
]
Exosomal proteins
Exosomal proteins of breast milk
IOD16_04990
Exosomal proteins of breast cancer cells
IOD16_04990
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QQQ77856
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All DBs
Position
complement(1062592..1064400)
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AA seq
602 aa
AA seq
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MREFSVPATATVAAEENLTDMVWANAERFGNAVSFRRRVDGTWVDVTARDFAAQVLAVAK
GLVAAGLQPGERVGLMSKTRYEWTLLDFAIWHAGGVVVPIYETSSAEQVEWILSDSSAKA
VFVETSEHRATVDSVVAGLPEVRHVWQLDGPSGDAAGAIDELTALGASVSDDDARARRKV
VGADDTATIVYTSGTTGRPKGCELTHRNLLSEVKGGITAFPQLMQAGNSLLVFLPLAHIL
ARALSVCGVYTRVTMGHTADVKNLVEDLQSFRPTFVVAVPRVFEKVYNGAKQKAHAAGKG
KIFDAAEATAVAYSQALDTGDVSLGLKLKHALFAKLVYSKLQAALGGRCTNAVSGGAPLG
ERLAHFFRGIGVPVLEGYGLTETSAAACVNTAAAFRVGTVGRPVIGTSVRIAEDGEILIK
GDIVFRGYWNNEQATSEALDDGWFHSGDIGELDEDGFLRITGRKKEIIVTAGGKNVSPAV
LEDRLRAHPLISQCMVVGDAQPFIGALITIDPEFFPAWKEQNGKAGSATVADLIDDETLR
AEIQTAVNEANQAVSKAEAIKKFRILPVDFTEAGGEMTPSLKLRRSVVATTYKQDIESIY
AG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgagttcagcgtccccgccaccgccactgtggctgccgaggagaacctcaccgac
atggtgtgggcgaacgcggagcgcttcggcaacgccgtcagcttccgccgccgcgtggac
ggcacgtgggtggacgtcaccgcccgcgacttcgccgcccaggtcctcgcggtcgccaag
ggtctggtcgcggcgggcttgcagccaggcgagcgggtgggcctgatgtccaagacccgc
tacgagtggaccctcctcgacttcgccatctggcacgcgggcggcgtcgtggtcccgatc
tacgagacctcctcggccgagcaggtcgagtggatcctgtccgactcctcggcgaaggcc
gtgttcgtggagacctccgagcaccgcgccacagtggactcggtggtggcaggcctgccc
gaggtgcggcacgtgtggcagctcgacggcccctcgggcgacgcggcgggcgcgatcgac
gagctgaccgcgctgggcgcctcggtgtccgacgacgacgcgcgggcccggcgcaaggtg
gtcggcgcggacgacaccgcgaccatcgtctacacctccggcaccaccggccggcccaag
ggctgcgagctgacccaccgcaacctgctgtccgaggtgaagggcgggatcaccgcgttc
ccgcagctcatgcaggcgggcaactcgctgctggtgttcctgccgctggcgcacatcctg
gcccgcgccctgtcggtctgcggcgtctacacgcgcgtgaccatgggccacaccgccgac
gtgaagaacctggtggaggacctccagtcgttccggcccacgttcgtggtggccgtgccg
cgcgtgttcgagaaggtctacaacggcgcgaagcagaaggcgcacgcggcgggcaagggc
aagatcttcgacgcggccgaggcgaccgcggtggcctacagccaggccctcgacaccggc
gacgtcagcctcgggctcaagctcaagcacgcgctgttcgccaagctcgtctacagcaag
ctccaggctgcgctgggcggccggtgcaccaacgcggtgtccggcggcgcgccgctcggc
gagcggctggcgcacttcttccgcggcatcggcgtgcccgtgctggagggctacggcctc
accgagaccagcgcggcggcgtgcgtgaacacggcggcggcgttccgggtcggcacggtg
ggccggccggtgatcggcacctcggtgcgcatcgccgaggacggcgagatcctgatcaag
ggcgacatcgtgttccgcggctactggaacaacgagcaggccacgtccgaggcgctggac
gacggctggttccacagcggcgacatcggcgagctcgacgaggacggcttcctgcggatc
accggccgcaagaaggagatcatcgtgaccgccggcggcaagaacgtctcgcccgccgtg
ctggaggaccgcctgcgcgcccacccgctgatcagccagtgcatggtggtcggcgacgcg
cagccgttcatcggcgcgctgatcacgatcgacccggagttcttcccggcgtggaaggag
cagaacggcaaggcgggttcggcgaccgtggccgacctgatcgacgacgagaccctgcgc
gccgagatccagaccgcggtgaacgaggccaaccaggcggtgtccaaggcggaggcgatc
aagaagttccgcatcctgccggtcgacttcaccgaggcgggcggcgagatgaccccgagc
ctcaagctccgccgctcggtcgtcgccaccacctacaagcaggacatcgaatcgatctac
gcgggctga
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