Saccharothrix sp. 6-C: IOD16_06650
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Entry
IOD16_06650 CDS
T09941
Name
(GenBank) RHS domain-containing protein
Organism
sacx
Saccharothrix sp. 6-C
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Tox-HNH-EHHH
TEN_YD-shell
RHS
DUF4595
DUF4726
EspA_EspE
DUF7030
OCRE
Motif
Other DBs
NCBI-ProteinID:
QQQ78147
LinkDB
All DBs
Position
complement(1408172..1412680)
Genome browser
AA seq
1502 aa
AA seq
DB search
MNNPLVATAKSDTTAVTGIGIAESANDLAQGISDGSWVAAGLGGIGVGLEVLSMVIDPIG
TVASYGVSWLIEHVQPLKEALDWFAGDPPVIRSFSETWSNVAAEVARIAEELGTQDAPGW
QGAAADTYRGHAAQTADAIAGAGTLAEGVGAGVMIMGEVVAAVREIIRDLVAEVVGKLIT
WALEAVATLGLATPLIVAQATSTIARVCNRIADLVRKLVKTIGNVTPRIRKVLDKLGEIM
EKLGKLGRRADTPSSPGTTSPSGAPSTPDAPTVKGADGTTSPSGTTSPSGTTSPSGTTSP
SGTTSPSGTTSPSGTAPSGTSPDSSPNGGTTPSGSPQPGSGKPGTSTSPDQPAPSRPTDP
DTSRTPEDQRRCVNDPIDVATGEMVIAKTDLALPGVLQVVLRRVHVSGYRAGRLFGPSWA
STLDQRVEVDPLGVVYVAEDGMRLVYPRPADGPVLPVAGPRWPLRRTPSGYTVTEPGTGV
TRHFDGGGSDIPLTALSHRSGQRIEVHRSADRIDLRHSGGYHVAVLVTDGLAGALGVVGA
DGTTAVAAYEYDDARHLVAIRNSSGAALLYDYDDAGRITGWQDRSGSWYRYVYDEQGRCV
RNVGSNGFLDGTFDYRPDRTVFTDSLGHSTTFHLNDRRQIVAEVDPLGNTVRTEWDAFDR
PLRRIDALGGIHAYRYDSDGNLIEVIRPDGYRSTAEFDADGQPTRIADADGHEWTWSYDG
AGRLLAATDPTGATTRYAYDEHGGLSEVTDAEGGTRRVRCDAAGLPVEVTVATGATTRYE
RDSFGRVIAVRDPVGGTTRASWTIEGKLARRTFPDGTVERFAYDGEGNLVEHVDALGQSS
RMEYGPFDMIVSETGPDGARVAFAYDTTLRLVAVTNANGETWRYHHDPAGRLLRETDFAG
RETRYTHDAAGRVVSRTNGAGQTVRIVRDAMGHVVEQSGPDSTAVFRRDSAGRVLEARND
DTHLVIERDPLGRVLRETVNDESVISTYDRVGRRLSRRTPSGAESRWVYDQAGAPVEMHT
AGHSLRFRYDAAGREVERTLADAAVLTQTWDTNHWLRAQAVTGPGTTGLIQRRSYNYRGD
GYVNRIIDQLSGVREYSLDPVGRVTSVDGPQWSERYAYDPAGNITAGHWPADEHDASLVG
AREFAGGQVRRAGAATFEHDAQGRVVARRSRTLSGKVRQWSFTWSSEDRLIEAVTPDGAR
WRYRYDPLGRRVAKDRLAPNGSVADSVRFAWDGPVLAEQRHSSGSSTVWEWQPGTFRAVS
QLDQDEVDARFYAIVTDVVGTPTELVDSSGAVAWHARPGIWGAGIVRTGPVTCPLRFPGQ
YHDPETGLHYNHHRYYDPSTARYTSVDPLGLTPSPNPYAYVFNPMGWTDPLGLEKCIDNR
SFNSRQEALDAAYDRAGIPRGSEPDARWEVGGDPTRRGEPGYRYSEDPGAHGNYSQFETP
DGSRVIAEHTNDPRAPQPHFHAGQPKGDPARDGVDFGWGGSSEFERYGQVDGKHHYYYPE
GT
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaccccctggtcgcgacggcgaagagcgacacgacggcggtcaccggcatcggc
atcgccgagtccgcgaacgacctggcgcagggcatctccgacggcagctgggtcgccgcc
ggcctcggcggcatcggcgtcggcctggaagtcctgtcgatggtcatcgaccccatcggc
accgtcgcctcctacggggtgtcgtggctgatcgagcacgtgcagccgctcaaggaagcc
ctggactggttcgccggcgacccgccggtgatccgctcgttcagcgagacctggtccaac
gtcgccgccgaggtcgcccgcatcgccgaggagctgggcacgcaggacgcgccgggctgg
cagggcgcggcggccgacacctaccgcgggcacgccgcccagaccgccgacgccatcgcc
ggcgcgggcacgctggccgaaggcgtcggcgccggcgtcatgatcatgggcgaagtcgtc
gccgccgtccgcgagatcatccgcgacctcgtcgccgaagtcgtcggcaaactcatcacc
tgggcactggaagccgtcgccaccctcggcctggccaccccgttgatcgtcgcccaggcc
acctccaccatcgcccgtgtctgcaaccgcatcgccgacctggtccgcaaactcgtcaag
accatcggcaacgtcaccccccgcatccgcaaagtcctcgacaagctcggcgagatcatg
gagaagctgggcaaactcggccgccgcgccgacacccccagcagccccggaaccaccagc
ccatcaggcgcaccgagcacgcctgacgcacccaccgtcaagggtgcggacggcaccaca
tcgccgtccggcacgacttccccctccggcaccacgtcgccctccggcaccacgtcgccc
tcgggcacgacctcgccatcgggaaccacctcaccgtccggcacagcaccgagcggcacc
agcccggacagttcgcccaatgggggcaccacaccgtcgggaagcccacagcccggctcc
ggcaagccggggacctcgacctcccccgaccagccggcgcccagcaggccgaccgacccg
gacaccagccggacaccagaggaccagcgccgctgcgtcaacgacccgatcgacgtggcc
acgggcgagatggtgatcgccaagaccgacttggcgctccctggggtgctccaggtcgtg
ctgcgcagggttcacgtgtccggctaccgcgcgggcaggctgttcggcccgagttgggcg
tcgacgctcgaccaacgggtggaggttgacccactcggtgtcgtctacgtcgccgaggac
gggatgcgcctggtctacccaaggcccgccgacggcccagtcctgccggtggcgggaccg
cgttggccgctgcgccgcacgccgtccggctacaccgtgaccgaaccgggcactggggtg
acccgccacttcgacggcggcgggtccgacatcccgttgacggcgctgagccaccgttcc
ggacagcgcatcgaggtgcaccgctcggccgaccggatcgacctgcgccactccggtggc
taccacgtcgcggtactggtcaccgacggcctcgcgggcgcgctcggggtcgtcggcgcc
gacggcacgactgcggtggcggcgtacgagtacgacgacgctcgtcacctggtcgcgatc
cggaattcgtcgggtgccgctctcctgtacgactacgacgacgcggggcggatcaccggc
tggcaggaccgcagcggcagttggtaccgctacgtgtacgacgagcagggccgttgcgtg
cgcaatgtcggcagcaacggcttcctcgacggcacgttcgactaccggcccgaccggacg
gtcttcaccgactcactcggccactccacgacgttccacctcaacgaccgcaggcagatc
gtcgccgaggtcgatccgctgggcaacactgtccgcaccgagtgggacgcgttcgaccgc
ccgttgcgccggatcgacgccctcggcggaatccacgcgtatcgctacgacagcgacggc
aacctcatcgaggtgatccgtcccgacgggtaccggtcgacggccgagttcgacgccgac
ggtcagccgacccgcatcgcggacgcggacggccacgagtggacctggtcctatgacggc
gccggccggttgctggccgccactgacccgacgggtgcgaccacgcgttacgcctacgac
gagcacggcgggctctcggaggtgaccgacgccgagggcgggacccgccgcgtccggtgc
gatgccgccggtctcccggtcgaggtcaccgtggccacgggcgcgaccactcgctacgaa
cgcgacagcttcggtcgggtcatcgccgtccgggacccggtcggcgggacgacgcgggct
tcgtggaccatcgagggcaagctggcccgccgcaccttcccggacggcaccgtcgagcgc
ttcgcctacgacggcgagggcaacctggtcgagcacgtcgacgcactgggccagtcgagc
cgcatggagtacggccccttcgacatgatcgtcagcgagaccggaccggacggtgcccgg
gtcgccttcgcctacgacaccactctgcggttggtcgcggtcaccaacgccaacggcgag
acctggcgctaccaccacgacccggcgggaaggctcctgcgcgagaccgacttcgcgggt
cgcgagacccgatacacccacgacgccgcgggccgggtcgtctcccggaccaacggtgcc
gggcagaccgtgcgaatcgtccgcgacgcgatggggcacgtcgtcgagcagagcggcccg
gattcgaccgcggtgttccgccgggacagcgcgggccgcgtgctggaggcccgcaacgac
gacacccacctggtcatcgaacgcgaccctctcggccgggtcctccgggagactgtcaac
gacgagtctgtcatctccacctacgaccgcgtcgggcgcaggctctcccgccgcaccccg
tccggcgcggagagccgatgggtctacgaccaggcaggcgcgccggtcgaaatgcacacc
gcggggcactccttgcggttccggtacgacgcggcgggccgtgaggtcgaacgaacgctc
gccgacgccgcggtcctcacgcagacctgggacaccaaccactggttgagggcacaggcc
gtcaccgggccgggcaccaccgggctgatccagcgacggtcctacaactaccgcggcgac
gggtacgtgaacaggatcatcgaccagctcagcggagtccgggagtactccctcgacccg
gtggggcgcgtcacctcggtcgacggtccgcagtggagtgagcgctacgcctacgacccc
gccggcaacatcaccgcgggccactggccggccgacgagcacgacgcgtcactggtgggt
gcccgggagttcgccggtgggcaggtccggcgcgcgggtgccgcgaccttcgagcacgac
gcgcaaggcagggtggtggcccggcgcagccgcacgctctccggcaaggtccggcagtgg
agcttcacgtggtccagtgaggaccggctgatcgaggccgtcaccccggacggcgcccgc
tggcgctaccgctacgacccgctgggccgccgggtcgccaaggaccggctggcaccgaac
gggtcggtagccgattccgtgcggttcgcctgggacggccccgtgctcgccgagcagcgg
cacagctccggttccagcacggtgtgggagtggcagccgggcaccttccgcgcggtcagc
cagctcgaccaggacgaagtggacgcccgcttctacgccatcgtcaccgatgtcgtcggc
acgccgaccgaactggtcgacagcagcggtgcggtggcctggcacgcgcgcccgggcatc
tggggcgccggcatcgtccgcaccggcccggtcacctgtccgctgcggttccccggccag
taccacgacccggaaaccggcctgcactacaaccaccaccgctactacgacccgtccacg
gcccggtacaccagcgtcgacccgctcgggttgaccccgtcgcccaacccgtacgcctac
gtgttcaacccgatggggtggaccgacccgctcgggttggagaagtgcatcgacaaccgg
tcgttcaacagccgccaagaggcactggacgccgcgtacgaccgggcgggcattccccgc
ggctccgagccggacgcccgttgggaggtcggcggcgacccgacacgccggggcgagccg
ggctaccggtactcggaggacccaggagcgcacggcaactactcacaattcgagacaccg
gacggctcccgcgtcatcgccgagcacaccaacgacccgagggcgccgcaaccgcacttc
cacgccgggcagcccaagggagacccggctcgcgacggcgtcgacttcggttggggcggc
agctcggagttcgagaggtacggtcaggtcgacggcaagcaccactactactacccggag
ggcacctag
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