Saccharothrix sp. 6-C: IOD16_15625
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Entry
IOD16_15625 CDS
T09941
Name
(GenBank) cellulose binding domain-containing protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sacx
Saccharothrix sp. 6-C
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
IOD16_15625
Enzymes [BR:
sacx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
IOD16_15625
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
CBM_2
FG-GAP
FG-GAP_3
New_glue
Motif
Other DBs
NCBI-ProteinID:
QQQ79696
LinkDB
All DBs
Position
3656997..3659252
Genome browser
AA seq
751 aa
AA seq
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MLTNSFRVRAIAAATAISALTGGLLVAGVASAAPGCGVDYVVQNKWQGGFSANVTIKNLG
DPVDGWALAWSFPGSERFGQGWNATFAASGASVTASNVDWNRSIPTGGTASFGFNGSTTG
DVVGVPTTFTLNGTTCTGGVDPTTTTGTSTTTSTTTTTTTTTTTTTTTPGPGPSDPTGRK
QVERLDRGVISVRSGSGNLVSWRLLGGDPQNVAFNVYRGGTKVNASPITASTNYLDGGAA
ADASYTVRAVVDGSEQAASPASLGFGSGYRDVPIQSPGSGYVANDASVGDLDGDGDYEFV
LKWDPDNAKDNSQSGVTGNVFIDAYTLQGTRLWRIDLGRNIRAGAHYTQFQVYDYDGDGK
AEVAMKTADGTRDGRGTVIGNASADYRNSGGYVLTGPEFLTMFNGQTGAAMSTVNYDPPR
GTVSSWGDNYGNRVDRFLAGTAYLDGARPSLIMARGYYTRAVIAAWDFRNGALTKRWTFD
SNSSGNSGYAGQGNHSLTVGDVDADGRDEIVYGAATIDDNGRGLWTTGLGHGDAAHLGDF
DPSRQGLEYFKVSEDSSKPGSWFADARTGARLWTTASGGDNGRGVADDIYAGSPGAESWS
AQDGSLRNPAGQNVGRKPSSMNFLVWWDGDPTRELLDQTRIDKYGTGGDTRLLTGSGVAS
NNGTKATPALSADLFGDWREEVVWRTSDNSALRIYSTPNQTDRRIPTLMHDTMYRVAIAW
QNTAYNQPPHPSFHIGNGMATPPWPDVHYAG
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaccaactcgttcagagtgcgggcgatcgccgccgccacggcgatcagcgcactg
accggaggcctgctggtcgccggtgtggcttcggcggcccccggctgcggggtcgactac
gtggtgcagaacaagtggcagggcgggttctccgcgaacgtcacgatcaagaacctgggc
gacccggtcgacgggtgggcgttggcctggtccttccccggctcggagcgcttcggccag
gggtggaacgcgacgttcgcggcctccggcgcgagcgtgacggcgtccaacgtggactgg
aaccggtcgatcccgaccggcggcacggcgtcgttcggcttcaacggctcgacgaccggt
gacgtggtcggcgtgccgacgacgttcacgctcaacggcaccacctgcacgggcggtgtc
gaccccacgacgaccaccggcacgtcgaccaccacgagtaccacgacgaccacgaccacc
accacgacgacgaccaccacgactccggggccggggccgtccgacccgaccggccgcaag
caggtcgagcggctggaccgcggcgtgatcagcgtccgctccgggtccggcaacctggtg
agctggcgcctgctgggcggcgacccgcagaacgtggcgttcaacgtgtaccggggcggg
accaaggtcaacgcctcgcccatcacggcctcgacgaactacctggacggcggtgcggcg
gcggacgcctcctacaccgtgcgcgccgtggtcgacgggtccgagcaggcggcctccccg
gcgtcgctcgggttcggctccggctaccgggacgtgccgatccagtcgccgggctccggc
tacgtggcgaacgacgcgagcgtcggcgacctggacggcgacggcgactacgagttcgtg
ctgaagtgggacccggacaacgcgaaggacaactcgcagtcgggcgtgaccgggaacgtc
ttcatcgacgcctacacgctccagggcacccgcctgtggcgcatcgacctgggccgcaac
atccgcgccggcgcgcactacacccagttccaggtctacgactacgacggcgacggcaag
gccgaggtcgccatgaagaccgccgacggcacgcgtgacggccgcggcacggtgatcggc
aacgcgagcgccgactaccgcaactccggcggctacgtgctgaccgggccggagttcctg
accatgttcaacggtcagaccggcgcggcgatgtcgaccgtgaactacgacccgccgcgc
ggcaccgtctcctcctggggcgacaactacggcaaccgcgtcgaccggttcctggcgggc
acggcctacctggacggcgcgcgtccgtcgctgatcatggcccgcggctactacacgcgc
gcggtcatcgcggcctgggacttccgcaacggcgcgctgaccaagcgctggaccttcgac
tccaactcctcgggcaactccgggtacgcgggccagggcaaccactcgctgaccgtcggg
gacgtggacgccgacggccgggacgagatcgtctacggcgcggccacgatcgacgacaac
ggccggggcctgtggaccaccgggctcgggcacggcgacgccgcccacctgggcgacttc
gacccgtcccgccagggcctggagtacttcaaggtctccgaggacagctccaagcccggc
tcctggttcgccgacgcccgcaccggagcgcggctgtggaccaccgcgagcggcggcgac
aacggccgcggggtggcggacgacatctacgcgggcagccccggcgcggagtcctggtcg
gcccaggacggcagcctgcgcaaccccgcgggccagaacgtcggccgcaagccgtcgtcg
atgaacttcctggtctggtgggacggcgacccgacccgcgagctgctcgaccagaccagg
atcgacaagtacggcaccggcggcgacacccgcctgctcaccggttccggtgtggcctcg
aacaacggcaccaaggccacgcccgcgctgagcgccgacctgttcggcgactggcgcgag
gaggtcgtctggcgcacctcggacaactccgcgctgcggatctactccacgcccaaccag
acggaccggcgcatccccacgctgatgcacgacaccatgtaccgcgtcgccatcgcgtgg
cagaacacggcctacaaccagccgccgcacccgagcttccacatcgggaacggcatggcc
accccgccgtggcccgacgtgcactacgccgggtga
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