Saccharothrix sp. 6-C: IOD16_17965
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Entry
IOD16_17965 CDS
T09941
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
sacx
Saccharothrix sp. 6-C
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sacx03000
]
IOD16_17965
Transcription factors [BR:
sacx03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
IOD16_17965
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_24
TetR_C_41
HTH_7
dnstrm_HI1420
HTH_IclR
HTH_23
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
QQQ80102
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Position
4318039..4318683
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AA seq
214 aa
AA seq
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MSGIVTTYHQRVAQEKRALIVEAATALFLELGYDRTSLARIAERSGVSRATLFKQFPSKA
ALFDAIVTESWSAADEEGPPPAGNVVDGLSTLGRRYAELLGRARMTDLFRIVIAELPRFP
ELAQAQFSRGKMPYFESVRRYLRAEHEAGTVRVEDVDLAATQFLGMISNYVFWPTLLVPD
WEVSAERVAQVVDEAVRTTAARYATTGPEAPTDD
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggatcgtgacgacgtatcaccagcgcgtcgcccaggagaagcgcgcgctgatc
gtggaggccgcgaccgcgctgttcctcgagttgggctatgaccggacgtcgctggcgcgg
atcgccgagcgctcgggcgtgtcgcgagccaccttgttcaagcagttcccgagcaaagcc
gccctgttcgacgccatcgtgaccgagtcctggtcggccgccgacgaggagggccctccg
ccggcgggcaacgtcgtcgacgggttgagcaccctcggtcgccgttacgccgagctgctg
ggccgtgcccggatgaccgacctgttcaggatcgtcatcgccgagctgccgcggttcccc
gagctggcccaggcgcagttctcacgcgggaagatgccctacttcgagtccgtgcgccgc
tacctccgggccgagcacgaggcgggcacggtgcgggtcgaggacgtggacctcgcggcc
acccagttcctgggcatgatctccaactacgtcttctggccgacactcctggtgccggac
tgggaggtgagcgccgagcgcgtcgcccaggtggtcgacgaggccgtccgcaccaccgcc
gcccggtacgccacgaccggacctgaggctcccaccgacgactga
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