Saccharothrix sp. 6-C: IOD16_19760
Help
Entry
IOD16_19760 CDS
T09941
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx00260
Glycine, serine and threonine metabolism
sacx00460
Cyanoamino acid metabolism
sacx00630
Glyoxylate and dicarboxylate metabolism
sacx00670
One carbon pool by folate
sacx00680
Methane metabolism
sacx01100
Metabolic pathways
sacx01110
Biosynthesis of secondary metabolites
sacx01120
Microbial metabolism in diverse environments
sacx01200
Carbon metabolism
sacx01230
Biosynthesis of amino acids
sacx01240
Biosynthesis of cofactors
sacx04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IOD16_19760
09102 Energy metabolism
00680 Methane metabolism
IOD16_19760
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IOD16_19760
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IOD16_19760
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IOD16_19760
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IOD16_19760
Enzymes [BR:
sacx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IOD16_19760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-ProteinID:
QQQ73530
LinkDB
All DBs
Position
complement(4762983..4764293)
Genome browser
AA seq
436 aa
AA seq
DB search
MHRAPGCCGSAPARVEVVVHEPAIPSLTGADPEVARLVQAEARRQFEKVRLIASENYVST
AVLEATGSVLTNKYSEGYAGRRYYEGQQVVDPVEELAVARAKALFGVDHANVQPYSGSPA
NLAVYLAFLEPGDTVMGMALPAGGHLTHGWSVSATGKWFRSVQYGVRQETGVVDLDQVRD
LARAERPKVIFCGGTAIPRTIDFAAFAQIADEVGAVLAADIAHIAGLVAGGAHPSPVGHA
QVITTTTHKTLRGPRGAMILTDAGHAKAIDKAVFPGLQGGPHNHTTAAIAVALGEAAEPS
FGLYAHAVVQNARALATALLDRGFDLVSGGTDNHLVLVDLTGKGIGGKPAAKALDRAGVE
ANYNTVPFDPRKPFDPSGVRLGTAAITTRGLTEDHMPQVAEWIDRAIRAADDGQALDRIA
AEVADLMAGYPMPGWA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcgcgcctgggtgctgcggcagcgcccccgcgcgcgtggaggtcgtcgtgcac
gaacccgcgatcccgtcgttgaccggagccgaccccgaggtcgcccgcctggtccaggcc
gaggcacgccgccagttcgagaaggtccgcctgatcgcctcggagaactacgtctcgacc
gccgtcctggaagccaccggctcggtgctgaccaacaagtactccgagggctacgccggc
cgccgctactacgagggccagcaggtcgtcgacccggtcgaggagctggccgtcgctcgc
gccaaggcgttgttcggcgtcgaccacgccaacgtccagccctactccggctcaccggcc
aacctcgccgtgtacctggcgttcctggaacccggcgacacggtcatgggcatggccctg
cccgccggcgggcacctcacccacggctggagcgtctcggccaccggcaagtggttccgc
agcgtccagtacggcgtgcgccaggagaccggcgtggtcgacctggaccaggtccgcgac
ctggcccgcgccgaacgccccaaggtgatcttctgcggcggcacggccatcccgcgcacc
atcgacttcgccgcgttcgcccagatcgccgacgaggtcggcgcggtgctcgcggccgac
atcgcgcacatcgcgggcctggtcgcgggtggcgcgcacccgtcaccggtcgggcacgcc
caggtgatcaccacgaccacccacaagacgttgcgcggcccgcgcggcgcgatgatcctc
accgacgccgggcacgcgaaggcgatcgacaaggcggtgttcccgggtctgcagggcgga
ccgcacaaccacaccacggcggccatcgcggtcgcgctcggcgaggcggcggagccgtcg
ttcggcctctacgcgcacgccgtcgtgcagaacgcccgcgcgctggccaccgccctgctc
gaccgcggtttcgacctggtctccggcggcaccgacaaccacctggtcctggtcgacctg
accggcaagggcatcggcggcaagcccgccgccaaggccctggaccgggcgggcgtggag
gccaactacaacacggtcccgttcgacccgcgcaagccgttcgacccgtccggtgtccgc
ctcggcacggccgccatcaccacccgcggcctcaccgaggaccacatgccgcaggtcgcg
gagtggatcgaccgggccatccgggcggcggacgacgggcaggcgctcgaccggatcgcc
gccgaggtcgccgacctgatggcgggctacccgatgcccggctgggcgtag
DBGET
integrated database retrieval system